Macadamia integrifolia (macadamia nut): 122087028
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Entry
122087028 CDS
T07436
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122087028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ming03021
]
122087028
Enzymes [BR:
ming01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122087028
Transcription machinery [BR:
ming03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
122087028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Zn_ribbon_ZPR1
Motif
Other DBs
NCBI-GeneID:
122087028
NCBI-ProteinID:
XP_042511921
LinkDB
All DBs
Position
8:complement(16601393..16648116)
Genome browser
AA seq
1389 aa
AA seq
DB search
MANVQHDRMQFSKEPYIEDVGPRKIKSIKFSMFSGDEIRKAAEVQVHKSSYYNELRRTIE
EGLLDSRMGPASKSGTCKTCHGSFATCPGHFGYLNLALPVYNVGYFSAILDILKCICKSC
ARVLLEEEKRIDFLRKMRNLKLEAQLKNNLMKQVVKKCVAMVASKKAVECSRCGYKNGTV
KKAGSMLSIIHDRSHVGDGSLEECNSAISHTKESKASFNVLHVLNPIRVLALFKRMVDED
CEMLYLSDRPEKLIVEDIAVPPVAIRPSVFMDAGMTSNEDDITMKLTMIIRENASLRQSL
RGVGTGLPFRCLDSWEILQVYVAQYINSDVRGIPSQLQPSKPMRGFVQRLKGKQGRFRGN
LSGKRVEYTGRTVISPDPNLKITEVAIPILMAQVLTYPERVSHHNIEKLRQRVRNGPHKY
PGANLIIYPDGAMMHLRFSARKRAADELKHGYIVERHLEDGDVVLFNRQPSLHRMSIMSH
RARVMPWKTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGE
ILVASTQDFLTSSFLITRKDTFYDRASFSLLCSYMGDAMDPIDLPTPALIKPIELWTGKQ
LFSVLVRPHAHMKVYLNLTVLEKTYSKSGETMCPNDGFVYFRNSELISGQVGKATLGNGN
KDGLFSVLLRDYNPHAAATCMNHLAKLSARWIGNHGFSIGIDDVQPGELLNCQKKARIEE
GYVACDELIQSFNKGNLKLQPGCDAAQTLEAEITGVLNKIRETAAKVCMEELHWRNSPLI
MSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSFY
TGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDGTVRNASGGVIQ
FLYGDDAMDPAQMEGKSGFPLNLDRLYLKVKATCPSRDNASLAPSEILRVLDDRLSRHDM
NPEGGCSDAFRNSLKDFVHKRIAMFRSTRRTLGLDEEHVQKDTSFVLENVAAHISGITSR
QLQVLLETCISRYHKKRIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPR
IKEIINGAKNISTPIITATLVSSDDVKSARFVKGCIEKTVLGEIAKGVKIVLTVRQASII
VTLDKERIAAAQLMVSAVSVKESILQQSKLKLKPQHIEIISDNKLRIIPPEADRSKLHFQ
LHSLKAMLPKVIVKGISTVERAVINKAKEKYNLLVEGTNLLAVMGTPGIDGHKTTSNHII
EVQGTLGIEAARRCIIDEIQYTMSSHGMSIDIRHMMLLADLMTYKGEVLGITRFGIQKMK
ESVLMLASFEKTADHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMLKVRQRVQQVSKL
NSGLDPIIC
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgtccaacatgatcgaatgcagttctcaaaggagccttacattgaagacgtc
gggccccggaaaataaagagtattaagttttcgatgttctctggagatgaaataaggaaa
gcagccgaggtgcaagttcacaagagttcatactataatgaactcagaaggacaatcgaa
gaaggattgttggattcacgaatgggtccggcaagtaaaagtggtacatgtaagacatgc
catgggagttttgctacatgtccagggcattttggatatttgaatcttgcactccctgtt
tataatgttggatactttagtgctatactggacatcctgaagtgcatatgcaagtcatgt
gctcgagtactattggaggaggaaaaacgtatagatttcttgaggaagatgagaaatctc
aaattggaggctcaactgaagaataatctaatgaaacaagtagtgaaaaagtgtgttgcc
atggtagctagtaagaaagcagtggagtgctctcgatgtggatataaaaatggtacggtg
aaaaaggccggctctatgttgagtattattcatgatcgctcacatgttggtgatgggagt
ttggaggaatgcaactcggcaatctctcatacaaaagaatcaaaggcatcctttaatgtg
cttcatgttctcaaccctattagagttcttgccctttttaaaaggatggtggatgaggac
tgtgaaatgctttacctttcagatagaccagagaagctcattgtagaggacattgcagta
ccacctgtagctattcgtccttctgtttttatggatgctgggatgacaagcaatgaagat
gatattactatgaaattaactatgattattagagaaaatgcttctctgcgacagagttta
cggggcgtaggtacaggtctaccattcagatgtttggactcttgggagattctccaggtt
tacgttgcacaatatataaacagtgatgttcgtggcattccgtcacaattgcagccttca
aagccaatgcgtggttttgttcaacgtctcaaggggaagcaaggacgtttccgtgggaac
ctatctgggaagcgtgttgaatatactggcagaactgttatttcaccggatcccaacctt
aaaattactgaggtggcaataccaatcttaatggctcaagttctaacttatcctgaacga
gtttcccatcacaatattgagaagttgagacagcgtgtccgcaatgggcctcataagtac
cccggggctaatctaattatatatcctgatggtgccatgatgcatttgaggttttctgcg
cgaaaacgtgctgctgatgaacttaaacatggttatatagtggaacgccatttggaagat
ggggacgttgttctttttaaccggcaaccaagcttgcaccgaatgtctatcatgtcccat
agggctagggtgatgccttggaaaacactaagattcaatgaatctgtttgcaatccatac
aatgcagactttgatggtgatgaaatgaatatgcatgttcctcaaacagaggaggctcgc
acagaggctcttatgctgatgggggtgcagaataacttatgtacaccaaaaaatggagaa
attttggttgcctctactcaggattttctaacatcatctttcctcattacaaggaaagac
accttttatgaccgtgcttccttttcacttttgtgttcttatatgggtgatgcaatggac
ccaattgatttgccaacaccagctttaattaagccaatagagctttggactgggaaacaa
ttatttagtgttctagtgcgccctcatgcacatatgaaggtttatctgaatctcactgtt
ttggagaaaacttatagcaaatcgggagaaacaatgtgtccaaatgacgggtttgtctat
ttccgcaatagtgaacttatttctgggcaagttggaaaggcaactctagggaatggcaat
aaggatggacttttctctgttcttcttcgagactacaatccacatgctgctgccacttgt
atgaatcacttagcaaaattaagtgcacggtggattgggaatcatggtttctcaattgga
attgatgatgtccagccaggtgaactgctgaattgccagaaaaaggcgaggattgaggaa
ggttatgtagcctgtgatgagttaatacagtcatttaacaaaggaaatcttaagcttcaa
cctggttgtgatgctgctcaaacattggaagctgaaataactggtgtgttgaataaaatc
cgagagacagctgccaaggtttgcatggaagaactgcattggaggaatagtcctttgatt
atgtcacaatgtggatccaaaggttctcctatcaatattagccagatgattgcatgtgtc
ggtcagcagtcagtcgggggtcgccgtgcccctaatggattcatagatcgaagtcttcca
cacttccctaggaaatcgaaaacaccagctgctaaaggctttgttgctaattctttttac
actggtttgacggcaacagaatttttctttcatacgatgggagggcgtgaaggtcttgtt
gatacagcggtgaaaacagctgacactgggtacatgtctcgccgattaattaaagctttg
gaggacctctcaattcattatgatggcactgtcagaaatgctagtggaggagttattcaa
tttctgtatggtgatgatgccatggatccggcacaaatggaagggaaaagtggttttcct
ttaaatttggacagattgtacttgaaagtgaaagctacctgtcctagtagagacaatgca
agtttggccccttcggaaatcttaagagttcttgatgatagactttcaagacatgatatg
aaccctgagggcggttgttctgatgccttcagaaattctctgaaggattttgtccacaaa
cgcattgccatgtttaggagcacaaggagaacattaggactggatgaagagcatgttcag
aaggatacttcttttgtcctagaaaatgttgctgcacatatatccggtattacttcccga
cagctacaggttttgctagagacctgcatttctcgttaccataaaaaaagaatcgaagct
ggaactgcaattggagcaattggagcacaaagtataggagaaccagggacccagatgaca
ttaaaaactttccactttgccggagttgcgagcatgaatgtcacacttggggttcctcgg
atcaaagaaataattaatggtgccaaaaatatcagtacacccattattactgccacactc
gtgtctagtgatgatgtaaaatctgcacgatttgtgaaaggttgtatcgagaaaacggtt
ttgggtgagattgcaaagggcgtgaagattgtattgacggtgagacaagcatcaataatc
gtcacacttgacaaggagaggatagcagctgcacaactgatggtctctgcagtcagtgta
aaagaatcaattttgcaacaatcaaaattaaaattgaagccccagcatattgagatcata
tctgataataagttaagaattattccacctgaagctgatagaagtaagcttcattttcaa
ctgcactctcttaaggctatgcttccgaaggttattgtaaagggcatatctactgttgaa
cgtgcggtcatcaacaaagccaaggaaaagtacaacttgcttgtggaagggacaaatctt
ctggcagttatgggaactccaggaattgatggacataaaacaacaagtaatcatatcatt
gaagtccaaggtactcttggaattgaagctgcaagaaggtgtatcatagatgaaatacag
tataccatgtcaagtcatggaatgagcatagacatacgccacatgatgctcttagcagat
ttaatgacatataaaggcgaagtgctaggaatcactagatttggcattcaaaagatgaaa
gagagtgttttgatgctggcatcatttgagaagacagcagatcatcttttcaatgcttca
gtaaatgggagggatgacaagattgagggagtaagtgaatgcatcatcatgggtattcca
atgcaaattggcacaggaatgcttaaagttaggcaaagggttcaacaggtttcaaaactt
aacagtggcctagacccaattatatgctga
DBGET
integrated database retrieval system
