Macadamia integrifolia (macadamia nut): 122087365
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Entry
122087365 CDS
T07436
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ming
Macadamia integrifolia (macadamia nut)
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ming04131
]
122087365
04121 Ubiquitin system [BR:
ming04121
]
122087365
Enzymes [BR:
ming01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122087365
Membrane trafficking [BR:
ming04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
122087365
Ubiquitin system [BR:
ming04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122087365
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-RING_11
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-Nse
CxC4
Rad50_zn_hook
HypA
Motif
Other DBs
NCBI-GeneID:
122087365
NCBI-ProteinID:
XP_042512398
LinkDB
All DBs
Position
8:complement(24491573..24493627)
Genome browser
AA seq
341 aa
AA seq
DB search
MSSNGNTHWCHRCGRPVRVRGRDATCPYCEGGFVQELDGMDGVGPFDFLGGLDSDDDHDH
RFGIMEAFSALMRQRMGRRNRDFDLRGRSGIGPDNGLAGFGAGYGAGPWLIFRGQVPVRM
SENGGIEVLFNGGPGVGLRRANVGDYFLGPGLDELIEQLTRNDRNGPPPAARSSIDAMPT
VKITQRHLRTDSHCPVCKERFELGSEARQMPCNHMYHSDCIVPWLVQHNSCPVCRHELPP
QGSSGSGASNRSSTSSGISSGREGSGDNQGRRNPFSYLWPFRSSNSNSNSNSNSNSNTNS
NTNANTNSNLNSHRTESSGSSSAAVREDNHQMSYSGWPFDY
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcaatgggaatacacattggtgccacagatgcgggcggcctgtgcgagtccga
ggacgagatgctacttgcccttactgtgaaggtggctttgtgcaagagcttgatgggatg
gatggggttgggccttttgatttccttggaggactggattctgatgacgatcatgaccac
agatttgggataatggaggctttctctgctctgatgaggcagcgaatgggtaggagaaac
cgcgactttgaccttagaggaaggtctggcattggtccagataatggtctggcagggttt
ggcgctggttatggtgctggtccttggctgatattccgtggccaagttcctgtcaggatg
tctgaaaatggtggcattgaagtgcttttcaatgggggtccaggagttggtttgaggcga
gctaatgttggtgattactttcttggcccgggactggatgaactgatagaacagctcact
cggaatgataggaatggaccgccaccggcagctcggtcttcaattgatgccatgccgaca
gtaaagatcacacagaggcatctgcgtactgattctcactgccctgtttgtaaagaaaga
tttgagttgggctctgaagcacggcagatgccatgtaatcacatgtaccactcagattgc
attgtcccatggttggttcagcacaattcctgccctgtctgccgccatgaattgccacca
caaggatccagtggttctggggctagcaacagaagtagcactagtagtggtatctccagc
ggaagggagggtagtggggataatcagggaaggcgtaacccattctcctacttgtggcct
ttccgctcatccaactccaactccaactccaactccaactccaactccaacaccaactca
aacacaaacgcaaacacaaactcgaacttgaactcacaccgtaccgaatcaagtggaagc
agttcagcagccgttcgtgaagataatcaccagatgagttactctgggtggccttttgat
tattag
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