KEGG   Macadamia integrifolia (macadamia nut): 122088299
Entry
122088299         CDS       T07436                                 
Name
(RefSeq) histone deacetylase 6
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
ming  Macadamia integrifolia (macadamia nut)
Pathway
ming03082  ATP-dependent chromatin remodeling
ming03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ming00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    122088299
   03083 Polycomb repressive complex
    122088299
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ming03036]
    122088299
Enzymes [BR:ming01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     122088299
Chromosome and associated proteins [BR:ming03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     122088299
   HDAC complexes
    Sin3A-HDAC complex
     122088299
    BRAF-HDAC complex
     122088299
    REST complex
     122088299
    SHIP complex
     122088299
    MiDAC complex
     122088299
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     122088299
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    122088299
  Chromatin remodeling factors
   NuRD complex
    122088299
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 122088299
NCBI-ProteinID: XP_042513443
LinkDB
Position
9:18829029..18834407
AA seq 477 aa
MEETSGASLPSGPDGKKRRVTYFYEPSIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHRRM
EINRPFPAGPDDIRRFHSDDYVEFLSSVTPETLHDHTHSRHLKRFNVGEDCPVFDGLFPF
CQASAGGSIGAAVKLNRGDADIALNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRR
VLYVDIDVHHGDGVEEAFFTTDRVMTVSFHKFGDFFPGTGHLKDIGVGTGKYYALNVPLN
DGMDDDSFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLR
SFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDYTLHVEPSS
MENQNSPKDLEKMRNVLLEQLSRIMHAPSVQFQARPPDTQVPDEGEEDMDQRPKPRIWGG
EDVGSESEDDENPQYDNSDVVDQSLADIGTREIKEEIEEEKEAKEENLPSAEMAEAQ
NT seq 1434 nt   +upstreamnt  +downstreamnt
atggaggagacatcaggagcgtctctgccatcagggcctgatggtaagaagaggagggta
acctacttctacgagccatcaataggggactactactacggccagggccacccaatgaag
ccccacagaatccgaatggcccacaacctcatcgtccactactccctccaccgtcggatg
gagatcaaccgtcccttccccgccggccccgatgatatccgacgtttccactccgacgac
tacgtggaatttctctcctccgtcactcctgagaccctccacgaccacacccattcacgg
cacctcaagcgcttcaatgtcggtgaagactgcccagtcttcgacggcctcttccctttc
tgccaggcctccgccggcggttccatcggcgccgccgtcaagctcaatcgcggcgacgca
gacattgccctcaactgggctggtggattgcatcacgccaagaagagcgaggcctctggt
ttctgttatgtcaacgacatcgttcttggtatccttgagcttcttaaggtccacaggcgg
gtgttgtatgtagatattgacgtccaccatggagatggagttgaggaggcatttttcaca
acagacagagtcatgaccgtttcttttcataaatttggggacttttttcctggaacagga
catctgaaggatataggagttgggactgggaagtactatgctcttaatgtccctctaaat
gatggaatggatgatgatagtttccggggcctgtttcggcctatcattcagaaagtcatg
gaggtttatcagccagatgcagtagttctccaatgtggggccgattccctgtcaggggac
aggttggggtgctttaacctgtcagtgaagggccatgctgactgccttcgtttccttaga
tccttcaatgttcccttgatggtcttgggtgggggagggtatacaatccgtaacgttgct
cgttgctggtgctatgagacagctgttgccgtaggggtggaacctgaaaataaattgcct
tataacgaatactatgaatactttggccctgattatactcttcatgtcgaaccaagcagc
atggagaatcaaaattcaccaaaagatttggagaaaatgaggaatgtgctgttggagcaa
ctttcaagaataatgcatgctcctagtgtacaatttcaggcacggccaccagacactcaa
gttccagatgagggagaggaggacatggatcaaagaccaaaaccgcgcatttggggtggt
gaagatgttgggtctgaatcggaggatgatgaaaatcctcaatatgacaactccgatgta
gttgatcagtctctggcagacatcggcacaagagaaatcaaagaagaaatagaagaggaa
aaagaagccaaagaagaaaatctaccctctgctgaaatggctgaagctcaatag

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