Macadamia integrifolia (macadamia nut): 122088371
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Entry
122088371 CDS
T07436
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ming
Macadamia integrifolia (macadamia nut)
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ming04131
]
122088371
04121 Ubiquitin system [BR:
ming04121
]
122088371
Enzymes [BR:
ming01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122088371
Membrane trafficking [BR:
ming04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
122088371
Ubiquitin system [BR:
ming04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122088371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
Zf_IFT144_1st
zf-C3HC4_3
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
122088371
NCBI-ProteinID:
XP_042513554
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All DBs
Position
9:29972..32026
Genome browser
AA seq
356 aa
AA seq
DB search
MGEVLDARYWCYMCCQIVDPVMEVEIKCPFCESGFVEEMNSRSDHDSGDTDLGSDRPLSL
WAPILLEMMGSGPRRRRFRREEGEDDSQRGEREHERVTESIRRRRSSAAILELLQGLRAG
IASESDNSESDRERERERERVILINHFNQAVILQGSFDLNQSDNQSQNAHGSLGDYFIGS
GLDLLLQHLAENDPNRYGTPPARKEAVEAMPTVKIEENMQCSVCLEDFEIGAEAKEMPCK
HRFHSGCILPWLELHSSCPVCRFQIPADESNLDSDAFMNRDNGVLSGSGSSGRDTDQSSG
EGSEGGNGDGRRPWVPIPWPFTGLFSLSGSQSGGNDSSQSSSSSSGGSRRASHTDN
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgggggaagtgctggatgctagatactggtgttatatgtgctgtcaaattgtggaccct
gtcatggaagtggaaatcaaatgcccattctgcgaaagcggttttgtggaagaaatgaat
agcagaagcgatcatgatagtggtgacaccgatttgggttctgaccgaccactctccctt
tgggctcccatcttgctggaaatgatgggtagtggtcctcggcgccgaagattcagacga
gaagaaggcgaggatgacagtcaacggggagaaagagaacatgagcgggtgacagaatcc
atccgtaggaggagaagctcagctgccatccttgaattgctccaaggccttcgtgctgga
atcgcatctgaatcggacaattcagagagtgatagggaaagagaacgtgagcgtgagcgt
gttatcctaatcaatcatttcaaccaggccgtaattctgcagggctccttcgacctgaac
caatccgataaccagagtcagaatgctcatggttccttgggtgactacttcattgggtct
ggtttggatctattgctgcagcacttggcggagaatgatccaaacagatatggaacccca
ccagcacggaaagaggcagttgaagcaatgcctactgttaaaattgaggagaacatgcag
tgttcggtatgtttagaggattttgaaataggtgcagaagccaaggagatgccgtgtaag
catagattccatagtgggtgtattctgccttggctggagcttcatagttcttgcccagtt
tgtaggtttcagattccggctgatgaatccaaccttgattcagatgcattcatgaatagg
gataacggggtgttgagcggcagtggtagcagtggccgtgacactgatcaaagtagtggg
gagggaagtgaggggggaaatggggatgggagaaggccttgggttcccattccatggcct
ttcactgggttgttttctttgtcaggatcacagagtggtggaaatgattcttcacagtca
tcatcttcatcctcagggggttctcgaagagcttctcacacagacaactga
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integrated database retrieval system
