Macadamia integrifolia (macadamia nut): 122089351
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Entry
122089351 CDS
T07436
Name
(RefSeq) extensin isoform X1
KO
K13095
splicing factor 1
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122089351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ming03041
]
122089351
Spliceosome [BR:
ming03041
]
Complex A
Other components
Complex A specific factors
122089351
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Ortholog
Paralog
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
SF1-HH
KH_1
DUF7798
Motif
Other DBs
NCBI-GeneID:
122089351
NCBI-ProteinID:
XP_042514942
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All DBs
Position
9:complement(9698481..9704154)
Genome browser
AA seq
962 aa
AA seq
DB search
MAIKVDQATVVTTSAAITSSSKVSMFSAKSGFVIPKNKLSGSLVPVFRCSGKSEASDATK
EESSKQIQRKTKWGTDLTQDAAVRRGRALAYQTRVEQITQQLKSGVLKTGEAQASVSPSQ
VLNCESSDHQINDKAQKIELLELERREIIGEILKLNPSYKAPSDYKPLLKEAVVPIPLKA
HPGFNFIGLLLGSGRNTLKRLEEETGAKVCVHGIRVGTGEKAEITRADGDEVQNAYEELY
VHVSADTHEKVDAAVALIELLVRPVSVNSAVVSTTPTSVSGDTVITVEQSQGLVTSYVMP
GAIGNQGVLQPMIGSSQPGPPQVQFRPYPSPWFPLGPTQTSIQSPSAFISLPNSSLPMPN
NLVQISPPPRIPSNNPPFFARFTPGSGFGSVSGNHPSLATRPQPSMPTLQWPYMHDTRPA
SHISPINNLMPVSQPLSAYPTASAQPNLTVPPAFTGNQHTPAGPVPVARQLVPQPFSSGP
LPNRPLTPAGSSGGWSGVPAIIPRGIGNTVQMTSSMVPPQRPHSMVQPNASVALPNISAT
VMSRPAPNVVPPASFPSLPHTPQLVNTSAVNRPAPTPGFVSVPAQVGSSPVSLASSQPSV
SVPVSSQTPGRLPAPSMAGHTQIPPAILPRAPVPIFAQASGTIPASAAASIQSTSPVPHV
QPVNLRAPVRNPLQNPVVGSSTVSSPVPSTSPQQQSGMPIGSGSLPSFTPMKPPVTSPGS
IPPVTTPKPQRPSSGDFTFQPLRSQHPAAQTVPRSSGQPPTQSTPPVLPPLAPQSPSFRP
ALHSLPQPGIQSFARPQAANPIGQPHAPSLTPSPGSIVPFGGNPPTTSLPPRPLVFPSSH
PIRPSTPVPQMRPQSFGSASHMPPIPSVLPLRPANPLQQQQNQLSQTIRPGNLLFPNQQF
NNNLSFASGKPASGPGGNQIYDPFSPTSVPSAPPRQGDSPAKVRKQENDPEYEDLMDSVG
VR
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggctataaaggttgaccaagccactgtcgtgactacatctgccgcaattacaagtagt
tctaaggtctcgatgttcagtgcgaagtctggatttgttataccgaagaacaaattatca
ggttctttggttcccgtatttcgatgctcgggaaagtcggaagccagtgatgccaccaaa
gaagaaagtagcaaacagattcagcggaaaacaaaatggggtactgacttgacacaagat
gctgctgtcaggagaggaagagccttagcgtatcagactcgagtggaacaaattacacaa
cagctgaaatcaggagttctgaagactggagaagcccaagcctcggtgtcacccagccag
gttctgaattgtgagtcttccgaccatcagattaatgataaggcccagaagattgaacta
ttggaactggaaagaagggaaattattggtgaaattctaaagctgaacccaagttacaag
gctccatctgattacaagccattattgaaagaggctgtagtacctattcctcttaaagca
catccaggattcaatttcattggtcttctattggggtctggaagaaatactcttaagaga
ttagaagaagaaactggagctaaagtatgtgtgcatggcattagagtaggcacaggagag
aaggccgaaattactcgggcagatggggacgaagtccagaatgcttatgaagagctgtat
gtccatgtatcagctgacacacatgagaaagttgatgctgcagttgctctaattgaactg
ttagtcagaccagtatctgttaattcagctgttgtttccacaactccaacttcagtttct
ggggacactgtcattactgttgagcaaagtcagggcctagttactagttatgtgatgcct
ggtgctattggaaaccagggggtgctgcaaccaatgattggatcttcacagcctggtcct
ccacaagtccagttccggccatatccaagtccttggttcccgctaggaccaacacaaacc
tccattcagtcaccctctgccttcatttctcttccaaattcttcattgcccatgcctaac
aatctggttcagatttctccaccccctcgtattccctcaaacaacccaccattttttgca
cggtttactcctggatcaggatttggctctgtttcagggaatcacccgtctctggccacc
agaccacagccatcaatgccgactttgcaatggccatacatgcatgacacacggcctgca
agccacatctcaccaataaacaatctcatgccagtctcgcagcctctttcagcatacccc
actgcatcagctcaaccaaatcttactgtaccaccagcatttactggtaaccaacataca
ccagctggaccagtaccagtggcaagacaactggtaccacaaccattttcatcaggacca
ttgccaaacaggccactaacccctgctgggagctctggtggttggtctggtgtacctgcc
ataatccctcgagggatagggaacacagtacagatgacttcatcaatggttccaccacaa
aggcctcattccatggtacaaccaaatgcatcggtagctcttccaaatatttcagcaact
gtaatgagtagacctgctccaaatgttgttcctcctgctagttttccttctctacctcac
actccccagttggtcaatacatcagcagttaaccgtccagcacctacaccaggttttgtt
tctgtaccagctcaagttgggtctagtcctgtgtcactggcgtcatctcaaccctcagta
tcagtaccggtatcttcacagacaccaggacgattgccggccccatctatggctggacac
acacaaattccaccagcaatacttcctcgagcaccagttccaattttcgctcaagcaagt
ggtacaattccagcatcagcagctgcgtccattcaatctacttcaccagtgccacatgtg
cagcctgtaaatttacgtgcaccagtgcgtaatccattgcaaaatcctgtggtgggttca
tcaacagtttcttcaccagtgccatcaacatcaccacaacagcaatctggaatgcctatt
ggttctggaagcttaccaagtttcactcccatgaagccccccgtgacaagcccgggaagt
attccaccagttacaactccaaaaccccagaggccaagttctggtgatttcacttttcag
cccctcaggtcccagcacccggctgctcaaacagttccaaggtctagtggacaaccccct
actcaaagtaccccaccagtactgccacctctggcacctcaatcaccatcttttcgacca
gctttgcattcattgccacaacctggcatacaaagttttgcaaggcctcaggctgccaat
ccaattggtcagcctcatgctccgtccttgacaccttcaccaggtagcattgtgcccttt
ggtggtaacccacccaccacctccctaccacctagacctctagtatttccaagttcacat
cctattcggccttctactcctgtgcctcaaatgaggccacagagctttggttcagcatca
catatgccgcccatacccagtgttttacctcttcgccccgcaaatccactgcaacagcag
cagaatcagctgtcccagacaattcgtccggggaacctcttgtttccaaatcagcaattc
aataacaatctctcatttgcatctggtaagccagcttccggtcctggaggaaaccaaatt
tatgacccattttcacccacttcagtaccttctgcccctccccgacaaggagatagtcca
gccaaagtgaggaaacaggagaatgacccagagtatgaggatctgatggattcagtgggt
gtgagatga
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