Macadamia integrifolia (macadamia nut): 122090479
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Entry
122090479 CDS
T07436
Name
(RefSeq) polyadenylate-binding protein 7-like
KO
K13126
polyadenylate-binding protein
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03015
mRNA surveillance pathway
ming03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122090479
09123 Folding, sorting and degradation
03018 RNA degradation
122090479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ming03019
]
122090479
03041 Spliceosome [BR:
ming03041
]
122090479
Messenger RNA biogenesis [BR:
ming03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122090479
mRNA cycle factors
Stress granule specific factors
122090479
Spliceosome [BR:
ming03041
]
Complex C
Other components
Complex C specific factors
122090479
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_MUD2_C
RRM_10
RRM_occluded
RBD_DEAH11
RRM_5
Nup35_RRM_2
RRM_ACIN1
RRM_RdRP1_2
RRM_3
SET_assoc
Motif
Other DBs
NCBI-GeneID:
122090479
NCBI-ProteinID:
XP_042516021
LinkDB
All DBs
Position
2:complement(28394427..28399297)
Genome browser
AA seq
637 aa
AA seq
DB search
MAVPSTVPAPASLYVGDLHPDITDGQLFDAFSVIENLASVRVCRDSMSGRSLGYGYANFI
TTHDAIRAIEKLNHTPLNGKPIRIMWSHRDPDARKNGIGNLFVKNLNDSIDNVKLYEMFS
EFGNILSCKVAMSLDGKSQGYGFVQFETEASASTAVEKLNGSIFGGKQIYVGNFVKKSER
VLPSPDAKYTNLYMKNLDTDITEELLQEKFSEFGKITNLVISKDSNGNSRGFGFVNFDDP
DDAKRAMEAMNGTQLGSKALYVARAQKKAEREQILHRQFLEKRKEQIQKYKDSNIYVKNI
ADDINDDELREHFSQCGTITSAKLMRDDKGISRGFGFVCFSSPEEATKAVNTLHGCMFCQ
KPLYVAIAQRKEDRRAQLQLQYSQRITGLAGPSTAVIPAGYPPLYYTPSGVVSQIPPRQG
LMYQPLGLRPGWRANGFAPPTRPAFQPMPLPVVPNTSRHNRQNRSRMNGHILPQGGGQNM
QFMPHLQQPTQSANSLKDSSNPQRAGQTKYVSNGHPHDMSNGSAVPLAAASNSVGSASQG
SEMLSSMLAAATPQHQKQMLGERLYPLVKKHKYDLAAKITGMLLEMDNSELLLLLESPES
LAAKVEEAVQVLKLSKNKVAGQDALIPNYLSTQVTVI
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgccttcgaccgtccctgcgcctgcttcgctttacgttggggaccttcaccct
gatatcactgatggacaactcttcgatgccttctccgtcatcgagaaccttgcatctgtc
agggtttgcagagattccatgtctgggagatcgcttggttacggttatgcaaacttcatc
actacccatgacgcaatccgtgcaattgagaaactgaaccacactccactgaatggaaaa
ccgattagaattatgtggtcgcatcgtgatccagacgcaaggaagaatgggattggaaat
ttgtttgtgaagaatttgaatgattctattgataatgtgaaactttatgagatgttctcc
gagtttggaaacatattatcctgcaaagttgcaatgtctctggatggaaagagccaagga
tatgggtttgtacagtttgagactgaagcatctgcgagtactgctgttgagaagcttaat
ggctccatttttggtggtaaacaaatatatgttggtaattttgtcaaaaagagtgagcgg
gttttacccagccctgatgccaaatataccaatctgtacatgaagaatctggatacagat
attacagaagaacttttgcaggaaaagttctctgagtttggaaaaattactaatctggta
atctcaaaggacagcaatgggaactcaaggggttttggatttgtgaactttgatgaccct
gatgatgcaaaacgggcaatggaggcaatgaatggaacacaacttggctcgaaggctttg
tatgtagcaagggcacagaagaaagcagagcgggagcaaatattgcatcgtcagtttctg
gaaaaacgcaaggagcaaatccagaaatataaggattcaaacatttatgtaaaaaatatt
gctgatgatatcaatgatgacgaattgcgagaacactttagtcagtgtggaacaatcact
tctgcaaagctcatgcgtgatgataaaggaattagtagggggtttgggtttgtgtgcttc
tctagtccagaagaagcaaccaaggctgtgaatactctgcatggatgcatgttttgccaa
aagcctttgtatgtggctattgcccaaaggaaagaggacaggcgagcacaattgcaactt
caatattcccagcgtattacaggattagcaggtccctcaactgcagtcattcctgctggt
tatcctcctctttattacacaccttccggtgttgtatcacaaattcctccgaggcagggc
cttatgtatcaacctttgggtttgagaccagggtggagggccaatggatttgcacctcca
accagaccagcttttcaacctatgccactacctgtggttcctaatacttcaagacataac
agacagaataggagcaggatgaatggccatatacttcctcagggtggtggacaaaatatg
caatttatgccacatttgcaacaacctactcaatcagctaattcattgaaagattcaagt
aatccgcagcgtgctggacagaccaaatatgtgtcaaatgggcatcctcatgatatgagc
aacggatctgcagttccattagctgctgcttctaactctgttggatctgcatcccaagga
tcagagatgttgagtagcatgcttgctgctgctacaccacagcatcagaaacagatgctt
ggtgagcgcctctaccccctagtgaagaaacacaagtatgatctagcagctaaaataact
gggatgcttttggagatggacaactctgaattactgctgttgttggaatcgccggagtcc
ttggctgctaaagtggaagaagcagtgcaggtgctcaagctatccaagaataaagtagct
ggccaagatgctcttattcccaactacttatcgactcaggttactgtcatctga
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