Macadamia integrifolia (macadamia nut): 122090525
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Entry
122090525 CDS
T07436
Name
(RefSeq) F-box protein SKP2A-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122090525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ming04121
]
122090525
Ubiquitin system [BR:
ming04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122090525
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
F-box-like
F-box
LRR_Zer-1
LRR_8
F-box_4
Motif
Other DBs
NCBI-GeneID:
122090525
NCBI-ProteinID:
XP_042516087
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Position
2:complement(15127493..15131956)
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AA seq
367 aa
AA seq
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MFGEGLKTGDLESCFQKLVVFGGGEGKMGGGVLTEWKDLPMELLLRIVSLVDDRTVIMAS
GVCTGWRDAICLGLTQLCLSWCNNNMNNLVLSLTPKFSKLRTLTLRQNKPQLQDNAVETI
AIFCHDLQDLDLSKSFKLTDRSLYALAHGCSNLTKLNISGCSALSDAALAYLTGFCRNLK
FLNLCGCVSAASDRALQAIACNCNQLQSLNLGWCEGVTDVGVMSLALGCPDLRALDLCGC
VLITDESVIAIANRCHHLRSLCLYYCQYITDRAMYSLANGRVKSKHDLWESVENGNDEDE
GLMNLNISQCTALTPSAVQAVCDSFPALHTCPGRHSLIKSGCLNLASVHCACSIQAHRAA
SPSHPAH
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtttggggaagggttaaaaactggtgatttagaatcttgctttcagaagcttgtagtg
tttggtggtggagaaggcaaaatgggtggaggagtattgactgagtggaaggaccttccc
atggagctcttgttgcggattgtttcgcttgttgatgatcggactgtgatcatggcttct
ggggtctgtactggctggagagatgctatttgcttagggcttactcagctctgcctatca
tggtgcaataacaatatgaacaaccttgtgctgtcacttacccccaagttcagcaaacta
cgaactctaactttacgtcaaaataaaccacagcttcaggataatgcggttgagaccatt
gcaatcttctgccatgatctgcaagacttggatctcagcaaaagcttcaagctcactgat
cgctccttatatgcattagctcatgggtgttctaaccttaccaagctcaacatcagtggt
tgttcggccttgagtgatgctgcccttgcatatcttactggcttctgcagaaacttaaag
ttcttaaatctttgtggatgcgtaagtgctgcatctgacagagctctgcaggccattgct
tgtaattgcaatcagttacagtctttgaatctgggttggtgtgagggtgtaactgatgta
ggagtgatgagcctggcacttggatgtccggatctgagggctttggacttgtgtggttgt
gtcctcataacagatgagagcgtgatagccatagcaaacaggtgccaccatttgagatcc
ctttgcctgtactactgccagtacataacagacagagccatgtattctctggcaaacggt
cgggtgaagagcaagcatgacctatgggaatctgtggaaaatgggaacgatgaggatgaa
gggctcatgaacctcaacatcagccaatgcacagctctgactccttcagccgttcaggct
gtatgcgactcgttccctgcgcttcacacatgccctggaagacattccctcataaagagt
gggtgtctcaacctagcatctgtgcactgtgcctgttctattcaagcacatcgtgcagcg
agcccctctcatcctgcacattga
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