Macadamia integrifolia (macadamia nut): 122090930
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Entry
122090930 CDS
T07436
Name
(RefSeq) plant-specific TFIIB-related protein PTF2
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
ming
Macadamia integrifolia (macadamia nut)
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ming03021
]
122090930
Transcription machinery [BR:
ming03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
122090930
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BRF2-like_C_cyclin_rpt
TFIIB
Zn_Ribbon_TF
GDH_C
Motif
Other DBs
NCBI-GeneID:
122090930
NCBI-ProteinID:
XP_042516640
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Position
10:complement(12407424..12409169)
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AA seq
535 aa
AA seq
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MSTSRSCKRCKKNTIVRDDITGACICTSCGIEQEFDNFQHSFGGINGPQGTFVRVGSSGS
GYDEFSYKERKLYGAQKEIEAITSNLGLLAATSAEVKQMIGTITEREFGCGTWFTVLIGA
CSYIVMRKNNRSLAIAEVASVIECDIHELGRMVTRVLDFLDLKLPEFDIVAHLERAIRSC
PSFSGISTDRMDTMIKQGRFLLQCAVNWFLTTGRRPLPVIVAVLAFVAELNQVQARIEDI
AKELHAAVATSKQRHKELLQTLVKVAQALPWGKNITVKNIVQNVPFLIQYIEMKSRSKSG
VRNENIGLAGFEVKEVVNQCLQEEDEYSTYDCKADSDSQYFDVRNRNGIPSSCSDEMEML
KLSQECLAKIYSKFKNECDYHQPMDESGECHRIKRRRGSGVPVHEWWTGESDLCKKLSLK
KILEKNVGFNTLPLSFVANSLSYKRRREKIMAARQRIKRVMLPRNVVSGGKEDCGLSEDL
LGETQQQWRVKEDLIDWEDCIIELLLLHMVKEEEIEQGYYNTLLDLHVFNSGCNC
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacctctcgctcttgcaagagatgtaagaagaataccatcgtccgcgatgacatc
acaggcgcctgcatctgtacttcttgcggcattgagcaggaatttgataacttccaacac
agtttcggtggcattaatggacctcagggcacctttgttcgcgtcggttcctcaggctct
ggctatgatgagttcagttacaaagagaggaaactctacggagctcagaaagagattgaa
gctatcacatcaaatctaggtctccttgctgccacttctgccgaggtcaaacaaatgatc
gggacaatcaccgaaagagagtttggttgtggcacttggttcactgttctgattggtgct
tgctcttatattgttatgagaaagaacaatcgatccctcgcaattgctgaagtcgcatcg
gtgatcgaatgtgatattcacgagcttggccgcatggttactcgtgttcttgatttcctt
gacttgaaattgcctgaatttgatattgtggcccatttggaacgggcgattcggagttgc
cctagtttttctgggatttccactgacaggatggatacgatgattaagcagggaaggttt
ctgttgcagtgcgcggtgaattggttcctgacaacaggacgaaggcctcttcctgtgatt
gtcgctgttttggcctttgtagccgaattgaatcaagttcaagctaggattgaagatata
gcaaaggaattacatgcggcggtggctacaagcaaacaacggcataaagagctcttacag
acgcttgtgaaagtggcacaagccttgccttggggaaagaacattacggtaaagaatatt
gtccaaaatgtgcctttcttgattcaatacatagagatgaagtcaaggtccaagagtggc
gttaggaatgagaatataggacttgctgggtttgaagttaaagaggttgtcaaccagtgc
ttgcaggaggaagatgaatattctacctatgattgcaaagcagacagtgattcgcagtat
tttgatgttaggaacaggaatggaatcccgagtagttgttctgatgagatggagatgcta
aagctgtcacaggagtgcttggctaagatttattcaaaattcaagaacgaatgtgattat
catcagcctatggatgagagtggagagtgtcatagaataaaaaggagaagaggaagtggt
gttccagtgcatgagtggtggacaggagagtcagatttgtgcaaaaagctctcactgaag
aaaattttggagaagaatgtagggtttaatactttgcctctgtcttttgttgcaaatagc
ttgtcttataaaagaaggagagaaaagataatggctgctagacaacgaatcaaaagggtt
atgttacctcgtaatgttgtttcaggtggaaaggaagattgtggcctttcagaagacttg
ctaggtgagacgcaacagcagtggcgagtgaaagaagatcttattgattgggaggactgc
attattgaattacttttacttcatatggtgaaagaagaggaaatagaacagggttactac
aataccttattggatttgcatgtttttaattcagggtgtaactgctag
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