Macadamia integrifolia (macadamia nut): 122091289
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Entry
122091289 CDS
T07436
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122091289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ming04121
]
122091289
Ubiquitin system [BR:
ming04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122091289
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_NXF1-5
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
122091289
NCBI-ProteinID:
XP_042517083
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Position
10:complement(28434522..28438821)
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AA seq
583 aa
AA seq
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MPMAYLFPEEVLEHVFSFIDSEKDRNAISLVCKSWYEIERWCRHRIFIGNCYAVSPRILI
RRFPEVRSVSMKGKPHFADFNLVPQGWGGFLYPWVAAMAQAYPWLEELRLKRMVVTDDTL
ELISRSFKNFEVLVLSSCEGFTTDGLASIAANCRNLRELDLRESEVNDPSGNWLSHFPES
CTSLVSLNFACLEGEVSFSALERLVGRCTNLRTLRLNQAVPLEKLPNLLHRAPQLVDLGT
GVYSAEVRPELYSKLAGAFASCKELKSLSGLWEVLPAYLPAIYPVCAGLTSLNLSYATIQ
SPDLTKLVSQCHNLQRLWVLDHIEDSGLHALAASCKDLQELRVFPSDPYSAVQNVSLTEQ
GLVSVSEGCPKFHSVLYFCRQMSNAALVTIARNRPNMTRFRLCILEPQIPDYLTLQPLDA
GFGAIVEHCKDLQRLSMSGLLTDLVFEYIGTHAKRLEMLSVAFAGDSDLGLHHVLSGCKS
LRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSLGACKLLGQKMRRLNVEVMDERE
PPDSRPDDCSVEKLYVYRSVAGPRLDNPNFVWTIDENSASRLS
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgccaatggcgtatttgtttcctgaagaggttctagagcatgttttctctttcattgac
tcggagaaggaccgaaatgccatttctcttgtctgcaagtcttggtacgagattgaacgg
tggtgtcggcatcggatcttcatcggcaactgctatgccgttagtccgaggattttgatt
agacggttccctgaggtccgatctgtgtctatgaaagggaaacctcattttgcagatttc
aatctggtgccacagggatggggaggttttctatacccttgggttgctgctatggctcag
gcttatccttggttggaggagctcaggctgaaacgtatggtggtgacggacgatacattg
gaactgatttctcgttcctttaagaactttgaggttttggttctttcgtcctgtgagggt
ttcactactgacggactcgcctccattgctgccaattgcaggaacctgagagagttagac
ttgcgggagagtgaagtgaatgatccgagtggaaattggcttagccatttcccggagtca
tgtacttcactggtttcccttaactttgcatgccttgaaggtgaggtgagcttctctgca
ctggaacgtctggtaggaaggtgcaccaacctcagaaccctacggctaaaccaagctgtg
cccctagaaaagcttcccaacctcctccatcgggcccctcagctggttgatctgggtaca
ggggtatactcagctgaggtccgtcccgaactctactcaaagcttgcaggtgcctttgca
agctgcaaggagcttaaaagcctgtctgggttatgggaagtgcttcctgcttatctgcca
gctatctaccctgtttgtgctggactcacatcgttgaacttgagctatgctaccatccaa
agcccggatctaacgaagcttgttagccagtgtcacaatctgcagcgattgtgggtactg
gatcacattgaagatagcggccttcatgctcttgcagcatcttgcaaggacttgcaggaa
ctgagggtatttccttcagatccgtatagtgcagtgcagaatgtctcactaacagaacag
ggccttgtctccgtttctgagggctgtcccaagtttcattcagtgctttacttctgccgc
caaatgtccaatgctgccctagttaccattgctagaaaccgccccaacatgacccgtttc
cgtctgtgcatccttgagcctcagattcctgattaccttactctacagccccttgatgcg
ggctttggtgctatagtggaacactgcaaggatctccagcgcctttccatgtctggcctc
ctcacagatctagtatttgagtacattggcactcatgccaagaggcttgagatgctgtca
gtggcctttgctggggatagtgacttgggcctccatcatgtactgtcggggtgtaagagc
cttcggaagctggagatccgggactgcccctttggtgacaaggctctcttggccaatgca
tcaaagctggagacaatgcgatccctttggatgtcttcatgctcggttagtttaggagcg
tgtaagctgttgggtcagaagatgcggaggctcaatgtggaagttatggatgagagggaa
ccaccagattctaggccggatgattgttctgttgaaaaactctatgtttatcgatcagtt
gctgggcctaggttggacaatccaaactttgtttggacaatagatgagaactctgcctcg
aggctttcttag
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