Macadamia integrifolia (macadamia nut): 122091804
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Entry
122091804 CDS
T07436
Name
(RefSeq) uncharacterized protein LOC122091804
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122091804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ming03021
]
122091804
03019 Messenger RNA biogenesis [BR:
ming03019
]
122091804
Transcription machinery [BR:
ming03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
122091804
Messenger RNA biogenesis [BR:
ming03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
122091804
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUFIP1
Motif
Other DBs
NCBI-GeneID:
122091804
NCBI-ProteinID:
XP_042517886
LinkDB
All DBs
Position
10:21554927..21568195
Genome browser
AA seq
661 aa
AA seq
DB search
MLPFSFHRPPNPTQTEGSNNSAPPQVVSSASCRADSGILSVGSNPMHQLPCSSCVYHNPL
VPVNSLQIHSQVNVFNPHLQRPFGNSNINLSALNGNYMAMPAGPSMVPSPSFPNVGNHYT
PQNIHVGMPILGPSGPHHLMQTHGQFFPNTTPQNFNPILTPSGHGQLFLNLPQNSNQLVP
SLAHAQLFMHNYPQVSSQIGPLQPGASMNVQGGNTYFHNHANPSTGMPDGQSCSQNQMCS
ASQHVAFVNSNEAAEHNKQDPRTFIPSNMGQNAFQESPILSEKLQENFIPSLTCPVQMQQ
TQKNLQQASFPQSQGNCLNNGGNNISYRNPRNPGVQKFARNFQKFGRRESANPRFQKPQL
HSTASAEGNFRNFNRNGGKGNKNDRARKSHLPYSPKLAEMEGRRSLPLSYTEQEVLQWRE
ERRKNYPSKVNIEKKFTEKRRNPELIANDAKRRCQQLKEILEKQAELGVEVAEIPPNYLS
EFDTQVCGREDEKKVYIKNRRSRNKYGKRGKCGKDSSSTMPAPMMRQPTLLQKLLSAEIK
RDKSHLLQAFRFMLMNSFFKDWPEKPLIFPSVTVRDMGCEGRAFEESSEQGNNGVCKVLE
NANVEEFEGPKHHNAAYDNGGKNDSENSAAEEEMLHEYAGEANHAMMEDVKSEPEEGEII
D
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccttctcgtttcatcgtccacccaacccaactcagactgaaggaagcaacaat
tcagctcccccacaggtcgtatcgtcagcttcttgccgtgcagattcagggattttatca
gttggtagcaatcccatgcaccaacttccatgttcctcttgtgtctatcacaatccttta
gttcctgtaaattccttacaaattcattctcaagttaatgtatttaatccccaccttcaa
agaccatttgggaattcaaatatcaatttgagtgccttaaatggaaattatatggctatg
cctgctggaccatctatggtgccttcacctagcttcccaaatgttggtaaccattatacc
ccacaaaatattcatgtgggtatgccaattttgggtccttcaggtcctcatcatttaatg
caaactcatggacagttttttcctaacaccaccccacagaattttaatccaatcttgacg
ccttccggacatgggcaattattccttaatttgccacagaattcaaatcaacttgtgcca
tctctagcccatgcacagttgtttatgcataactatccacaagtttcaagtcagattgga
cccttgcaaccaggtgcatccatgaatgtgcaaggtgggaacacctattttcacaatcat
gcgaacccaagtactggcatgccagatggacagtcatgttcgcagaatcaaatgtgtagt
gcaagtcaacatgtagcatttgttaactcaaatgaagctgcagagcacaataaacaagat
cctcgtacttttatcccatctaatatgggtcagaatgcttttcaagagtcaccaatttta
tctgagaaactacaagaaaattttattccatcgcttacatgtccggttcaaatgcaacaa
actcagaagaacttgcagcaagccagtttcccgcagtcacaggggaattgtttaaataat
ggtggaaataatatctcatacagaaacccaaggaatcctggagtccagaagtttgcaaga
aattttcagaaatttggaagacgagaatcagcaaatccaaggtttcagaaacctcagctt
cattccacggcaagtgcagagggaaacttcaggaacttcaacagaaatggtggaaaaggg
aacaagaatgacagagcaagaaaatctcatcttccttattctcccaaactagctgagatg
gaaggtcgaaggtctctgcccttgagctacactgaacaagaagtcctacaatggcgtgaa
gagaggaggaagaactacccatctaaagtcaatatagagaagaagtttactgaaaaaagg
agaaaccctgaacttatcgctaatgatgccaaaagacgctgtcagcaacttaaggagatt
ctggaaaaacaggccgagttgggtgttgaagttgcagaaattcctccaaactatctatct
gagtttgatacacaagtttgtggaagggaggatgagaaaaaggtctatattaagaatcgg
agatcccggaacaagtatggtaaaagaggaaaatgtggtaaagacagttcttctaccatg
cctgctccaatgatgagacagccaacccttttgcagaagcttctaagtgcagagataaag
agagataagagtcatctgctgcaagcgttcaggttcatgttgatgaattctttctttaaa
gattggcctgagaagcctttgatatttccctctgttacagttagagacatggggtgtgag
ggtcgggcttttgaggaatcttcagagcagggaaataatggtgtttgtaaggttcttgag
aatgctaatgttgaggaatttgagggtccaaaacatcataatgcagcatatgacaatggt
ggtaaaaatgattctgaaaacagtgctgctgaggaggaaatgcttcatgagtatgccggg
gaggctaatcatgctatgatggaggatgttaagtctgagccagaagaaggagagattata
gactag
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