Macadamia integrifolia (macadamia nut): 122091849
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Entry
122091849 CDS
T07436
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 40-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122091849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ming03041
]
122091849
03009 Ribosome biogenesis [BR:
ming03009
]
122091849
Enzymes [BR:
ming01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122091849
Spliceosome [BR:
ming03041
]
Complex A
U1 snRNP components
U1 related factors
122091849
Complex B
122091849
Ribosome biogenesis [BR:
ming03009
]
Eukaryotic type
Pre-60S particles
Helicases
122091849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_19
Motif
Other DBs
NCBI-GeneID:
122091849
NCBI-ProteinID:
XP_042517959
LinkDB
All DBs
Position
10:complement(32777258..32782474)
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AA seq
716 aa
AA seq
DB search
MCFSLSLSLSKSFKRVVEVGSALFLTFDTIVAISQQENRMDGVPPHNPNPGHPGGLNIVA
GHVMPNLYNHAAGVQVFSNSATVRPPRMVGSSDVGNLSPAEVYCRQNEVTATGDNVPAPF
MTFEATGFPPEILREIHLAGFSSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYIIPAF
IHLRQCRNNPQNGPTVLVLAPTRELATQIQDEVIKFGRSSRVSCTCLYGGAPKGPQLREL
DRGADIVVATPGRLNDILEMKKIDFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQ
TLMYTATWPKEVRKIAGDLLVNPVQVNIGSVDELAANKAITQYVEVVPQMEKQRRIEQIL
RSQERGSKIIIFCSTKRLCDQLARSIGRNFGAAAIHGDKSQGERDWVLNQFRSGKSPILV
ATDVAARGLDIKDIRVVINYDFPTGIGDYVHRIGRTGRAGATGVSYTFFSDQDWKYAADL
VKVLEGANQRVPPELQEMAVRGGPIMGKGRGGMGRRDSGGGRFDSGGGRFDSGGGRWDSG
GRGGSRDGGFSARGGRNDFFGGRGNRGRGFGGPGSGPVGWGRHEQGPRDRYDSVNGRGRY
DNRRSDKFRRSYGRSRSPSRSWSRSRSRSRSRSRSRSWSRSLSRSRSRSRSRSYERYERS
RGQNRDLGSKEPEYDAGPEESRLSPMSPGATQGGTILGIEPAIQLPIGDSTGSGIL
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttctctctctctctctctctctcaaaatcttttaagcgtgttgtagaagttgga
tctgcattatttcttacatttgatactattgttgctatttcacaacaggaaaacaggatg
gatggtgttcctcctcataatcccaaccctggtcatcctgggggattgaatattgtagca
gggcatgtaatgcccaatttgtacaatcatgctgctggtgttcaagttttttctaatagt
gcaacagtaagacctccaaggatggttggctcctcagatgttggaaatctctcacctgct
gaagtatactgtcgacaaaatgaagttactgcaacgggtgacaatgttcctgctcccttc
atgacttttgaagccactggtttccctccagagatactcagagagatacatcttgctggc
ttctcttctcccacgccaatacaggcgcagacatggccgattgcactacagagtagggat
atagtggccattgccaaaacaggttctgggaagaccttgggctacattattcctgcattt
attcatctgagacaatgccgaaataaccctcagaatggtccaacggtgttggttctggct
cctacacgtgagcttgcaacacaaatacaagatgaggttatcaagttcggccgttcttct
agggtctcttgcacttgtttgtatggtggagctccaaagggccctcagcttcgagaattg
gatcgaggggcagatattgttgttgccacccctggtcggctcaatgatatccttgagatg
aagaaaattgactttcgtcaagtatctctccttgtccttgatgaggcagatcgaatgctt
gatatgggttttgaacctcaaatccgcaagattgtgaatgagattcccccacgtcggcag
actctcatgtacactgcaacctggcccaaggaggtcaggaaaattgcgggagatctactt
gttaatcctgttcaagtgaatattggcagtgttgatgagcttgcagcaaacaaggccatc
acacagtatgttgaggtggtcccgcaaatggagaagcagagacgcatagaacagattctt
aggtcccaagaacgtgggtcaaagataatcatcttctgctcgacgaagaggttgtgtgac
cagcttgcacgcagtattggccgcaattttggtgctgctgcaattcatggagacaaatct
cagggtgagagggactgggttctcaatcagttccgcagtgggaaatcgccaatattggtt
gccacagatgtggctgctcgaggtcttgacattaaggacatcagggttgtgatcaactat
gatttccccacgggaataggagattatgttcaccgcattggaagaactgggagggctggt
gcaacaggggtatcatacaccttcttctctgatcaggattggaagtatgcagctgatctg
gtaaaggttttggagggtgccaaccagcgagttccacctgaactgcaagagatggctgta
cgtggtgggcccattatgggaaaggggcggggtgggatgggtcgtcgggattctggtggt
gggcgttttgattccggtggtgggcgttttgattctggtggtggacgttgggattctggt
ggtcgtggtggatcgagggatggtggcttcagtgcccgtggtgggaggaatgactttttt
ggtggaaggggaaaccgggggcggggatttggtggtcctggtagtggtccagttggttgg
ggaaggcatgaacagggaccacgtgatcgttacgacagtgttaatgggagggggcgatat
gataacagaagatcagataagtttcgtagaagttatggcaggagtcgtagcccaagccga
agttggtcccgtagcaggagcaggagcaggagcaggagcaggagcaggagctggagcagg
agcctcagccgaagccgaagccggagccggagccgtagctatgaaagatatgagaggtca
cgtggacagaatcgtgaccttggttctaaggaaccggaatatgatgctggccccgaagaa
tcgaggttgtcccccatgtcccctggagcaactcaaggtggcacaatcttgggaattgag
cctgcaattcagctcccaataggtgatagcactggatctggtatcctgtga
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