KEGG   Macadamia integrifolia (macadamia nut): 122091849
Entry
122091849         CDS       T07436                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 40-like isoform X1
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
Organism
ming  Macadamia integrifolia (macadamia nut)
Pathway
ming03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ming00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122091849
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ming03041]
    122091849
   03009 Ribosome biogenesis [BR:ming03009]
    122091849
Enzymes [BR:ming01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     122091849
Spliceosome [BR:ming03041]
 Complex A
  U1 snRNP components
   U1 related factors
    122091849
 Complex B
    122091849
Ribosome biogenesis [BR:ming03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    122091849
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C AAA_19
Other DBs
NCBI-GeneID: 122091849
NCBI-ProteinID: XP_042517959
LinkDB
Position
10:complement(32777258..32782474)
AA seq 716 aa
MCFSLSLSLSKSFKRVVEVGSALFLTFDTIVAISQQENRMDGVPPHNPNPGHPGGLNIVA
GHVMPNLYNHAAGVQVFSNSATVRPPRMVGSSDVGNLSPAEVYCRQNEVTATGDNVPAPF
MTFEATGFPPEILREIHLAGFSSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYIIPAF
IHLRQCRNNPQNGPTVLVLAPTRELATQIQDEVIKFGRSSRVSCTCLYGGAPKGPQLREL
DRGADIVVATPGRLNDILEMKKIDFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQ
TLMYTATWPKEVRKIAGDLLVNPVQVNIGSVDELAANKAITQYVEVVPQMEKQRRIEQIL
RSQERGSKIIIFCSTKRLCDQLARSIGRNFGAAAIHGDKSQGERDWVLNQFRSGKSPILV
ATDVAARGLDIKDIRVVINYDFPTGIGDYVHRIGRTGRAGATGVSYTFFSDQDWKYAADL
VKVLEGANQRVPPELQEMAVRGGPIMGKGRGGMGRRDSGGGRFDSGGGRFDSGGGRWDSG
GRGGSRDGGFSARGGRNDFFGGRGNRGRGFGGPGSGPVGWGRHEQGPRDRYDSVNGRGRY
DNRRSDKFRRSYGRSRSPSRSWSRSRSRSRSRSRSRSWSRSLSRSRSRSRSRSYERYERS
RGQNRDLGSKEPEYDAGPEESRLSPMSPGATQGGTILGIEPAIQLPIGDSTGSGIL
NT seq 2151 nt   +upstreamnt  +downstreamnt
atgtgtttctctctctctctctctctctcaaaatcttttaagcgtgttgtagaagttgga
tctgcattatttcttacatttgatactattgttgctatttcacaacaggaaaacaggatg
gatggtgttcctcctcataatcccaaccctggtcatcctgggggattgaatattgtagca
gggcatgtaatgcccaatttgtacaatcatgctgctggtgttcaagttttttctaatagt
gcaacagtaagacctccaaggatggttggctcctcagatgttggaaatctctcacctgct
gaagtatactgtcgacaaaatgaagttactgcaacgggtgacaatgttcctgctcccttc
atgacttttgaagccactggtttccctccagagatactcagagagatacatcttgctggc
ttctcttctcccacgccaatacaggcgcagacatggccgattgcactacagagtagggat
atagtggccattgccaaaacaggttctgggaagaccttgggctacattattcctgcattt
attcatctgagacaatgccgaaataaccctcagaatggtccaacggtgttggttctggct
cctacacgtgagcttgcaacacaaatacaagatgaggttatcaagttcggccgttcttct
agggtctcttgcacttgtttgtatggtggagctccaaagggccctcagcttcgagaattg
gatcgaggggcagatattgttgttgccacccctggtcggctcaatgatatccttgagatg
aagaaaattgactttcgtcaagtatctctccttgtccttgatgaggcagatcgaatgctt
gatatgggttttgaacctcaaatccgcaagattgtgaatgagattcccccacgtcggcag
actctcatgtacactgcaacctggcccaaggaggtcaggaaaattgcgggagatctactt
gttaatcctgttcaagtgaatattggcagtgttgatgagcttgcagcaaacaaggccatc
acacagtatgttgaggtggtcccgcaaatggagaagcagagacgcatagaacagattctt
aggtcccaagaacgtgggtcaaagataatcatcttctgctcgacgaagaggttgtgtgac
cagcttgcacgcagtattggccgcaattttggtgctgctgcaattcatggagacaaatct
cagggtgagagggactgggttctcaatcagttccgcagtgggaaatcgccaatattggtt
gccacagatgtggctgctcgaggtcttgacattaaggacatcagggttgtgatcaactat
gatttccccacgggaataggagattatgttcaccgcattggaagaactgggagggctggt
gcaacaggggtatcatacaccttcttctctgatcaggattggaagtatgcagctgatctg
gtaaaggttttggagggtgccaaccagcgagttccacctgaactgcaagagatggctgta
cgtggtgggcccattatgggaaaggggcggggtgggatgggtcgtcgggattctggtggt
gggcgttttgattccggtggtgggcgttttgattctggtggtggacgttgggattctggt
ggtcgtggtggatcgagggatggtggcttcagtgcccgtggtgggaggaatgactttttt
ggtggaaggggaaaccgggggcggggatttggtggtcctggtagtggtccagttggttgg
ggaaggcatgaacagggaccacgtgatcgttacgacagtgttaatgggagggggcgatat
gataacagaagatcagataagtttcgtagaagttatggcaggagtcgtagcccaagccga
agttggtcccgtagcaggagcaggagcaggagcaggagcaggagcaggagctggagcagg
agcctcagccgaagccgaagccggagccggagccgtagctatgaaagatatgagaggtca
cgtggacagaatcgtgaccttggttctaaggaaccggaatatgatgctggccccgaagaa
tcgaggttgtcccccatgtcccctggagcaactcaaggtggcacaatcttgggaattgag
cctgcaattcagctcccaataggtgatagcactggatctggtatcctgtga

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