KEGG   Macadamia integrifolia (macadamia nut): 122091860
Entry
122091860         CDS       T07436                                 
Name
(RefSeq) WD repeat-containing protein 48 homolog
  KO
K15361  WD repeat-containing protein 48
Organism
ming  Macadamia integrifolia (macadamia nut)
Pathway
ming03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ming00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    122091860
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ming03400]
    122091860
DNA repair and recombination proteins [BR:ming03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     122091860
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_TEP1_C Beta-prop_SPT8 Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_WDR75_2nd ANAPC4_WD40 WD40_RFWD3 RAWUL Beta-prop_DCAF12 Beta-prop_IFT140_1st WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 122091860
NCBI-ProteinID: XP_042517982
LinkDB
Position
10:complement(28379935..28404710)
AA seq 766 aa
MHRVGSAGNTSNSSRPRKEKRLTYVLNNADDKMHCAGINCLALLRTSVSDGCDYLFTGSR
DGTLKRWALAEDAATCSATFESHVDWVNDAVLAGNNILVSCSSDTTLKTWNCSSDGTCTR
TLRQHTDYVTCLASAQKNSNIVASGGLGGEVFIWDLEAALVPVSMATDAKEDDCSNGIIS
TGNTGLPLTNLRSIGSSSSISLHQTQPHGYSPIGAKGHKESVYALAMNDDGSLLVSGGTE
KVVRVWDPRTGSKAMKLRGHTDNIRALLLDPTGRFCLSGSSDSMIRLWDLGQQRCVHSYA
VHTDSVWALASSPTFSHVYSGGRDLSLYLTDLATRESVLLCTKEHPVLQLALHDDGIWVA
TTDSSVHRWPSDGRNLQKAFQRGGSFLAGNLSFSRARACLEGSTPVPVYKEPSFTILGTP
GIVQHEILNNRRHVLTKDTAGSVKLWEITRGIVVEDYGKVSFEEKKEELFEMVSIPAWFT
TDTRLGSLSIHLDTPQCFSAEMYSADLNIPGKPEDDKVNLARETLKGLLAHWLAKRRQKA
ASHASANGDGSSGKDFLSRNHSHSRAEVDGNAENDSMVYPPFEFSTVSPPSIITEGSHGG
PWRKKITELDGTQDEKDFPWWCLDCILNSRLPPKENTKCSFYLQPCEGATVQIVTQGKLS
APRILRVHKVINYVIEKLVLDKPLDGGNSDSTFAPVLGVGHSQLSTVGGEGSFRPGLKPW
QKLKPSIEILCNNQVLPPDMSLATVRAYIWKKPDDLVLNYRLLQGR
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgcatcgtgtaggtagtgcggggaacacatccaactcatcccgcccaaggaaggaaaag
aggttgacttatgtgctgaacaatgctgatgacaaaatgcattgtgcagggataaattgc
ttggcgctattaaggacatcagtatctgatggttgtgactatctattcactggaagccga
gatggaacactgaagagatgggcactggctgaagatgctgccacttgctctgctacattt
gagtctcatgttgactgggtcaatgatgcagtacttgcaggcaataacatccttgtgtca
tgctcttcggacaccaccctcaagacgtggaattgctcatctgatgggacttgtactaga
actctccggcaacacactgactatgttacttgtcttgcttcagcccagaaaaatagcaat
attgttgcgtctggtggccttggtggggaggtttttatatgggaccttgaagctgcactt
gttccagtctcaatggccactgatgccaaggaagatgactgttcaaatggtataattagt
actgggaatactgggctgcctttgacaaatttacgttctattggttcaagcagcagcatt
tcactccatcagactcagccacatggatatagtcctattggtgctaagggccataaagag
tctgtttatgcattggcaatgaatgatgatggaagtttacttgtttctggtggaactgag
aaggttgtccgtgtttgggatcctagaactggttcaaaggctatgaagctaagggggcac
acagataacatacgggctctgcttctagatcctactgggagattttgcttatcaggatcc
tctgattctatgatcagactatgggatcttggtcagcagcgttgtgtacattcctatgct
gtacataccgactctgtttgggcacttgccagcagcccaacattcagccatgtttatagt
ggtgggagggatctttctttatacctaacagacttggcaacaagagaaagtgtgctgctt
tgcacaaaagaacaccctgttttgcaacttgcactgcatgatgatggtatatgggtcgca
acaacagattcttctgtacataggtggccgtctgatggaagaaacctgcagaaggctttt
caaagaggtggttcatttttggctggcaatttgtccttttctagggcaagagcttgttta
gaaggatctactcctgtgcctgtttacaaagaaccatcatttacaattcttggaactcct
ggaattgttcaacatgaaattctaaacaacagaaggcatgtcctgacaaaggatacagca
ggctcagtgaagctatgggagatcactagaggaattgtggttgaggattatggcaaggtc
tcatttgaagagaagaaggaagaactatttgagatggtgagtattcctgcatggttcact
acagataccaggcttggaagcttgtctatccatttggacacaccacaatgcttttctgcg
gaaatgtattctgctgacctgaatatacctgggaaacctgaggatgacaaggtcaatcta
gcacgagagacgcttaaaggtttgttggctcattggttggccaaaagaaggcaaaaagca
gcatcacatgcttcagccaatggtgatggttcatcagggaaggattttctttctagaaat
cattcccattcaagagctgaggttgatggtaatgcagaaaacgactcaatggtttaccct
ccattcgagttttctacagtttctcctccttctataattactgagggctctcatggaggc
ccatggagaaagaagatcactgagttggatggtactcaagatgagaaggattttccatgg
tggtgtcttgattgtattttgaatagtcgattgccaccaaaagaaaataccaagtgcagc
ttttatctacaaccttgtgaaggagcaactgtccaaattgtcacacaggggaaactgagt
gcacctcggatattgcgagtgcataaagttatcaactatgtcatagaaaaactagttctt
gacaaaccattggatggtgggaattcggatagtacatttgctccagtactgggtgttgga
cattcgcaactgtcaacagttgggggagaaggctccttccggcctggcttgaagccctgg
cagaaactaaaaccttcaatagagatcttgtgcaataatcaggtcttacctccagacatg
agcttagccacggttcgagcttatatatggaagaaacctgatgatttggtcctgaattac
agacttttgcaaggccgatga

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