Macadamia integrifolia (macadamia nut): 122092020
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Entry
122092020 CDS
T07436
Name
(RefSeq) exosome complex component RRP4 homolog
KO
K03679
exosome complex component RRP4
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122092020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ming03019
]
122092020
Messenger RNA biogenesis [BR:
ming03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122092020
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
122092020
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
122092020
NCBI-ProteinID:
XP_042518240
LinkDB
All DBs
Position
10:23703444..23706514
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AA seq
156 aa
AA seq
DB search
MNALRDLQLPLNQTQNIRLQRALQQLRELDSKASSLSSVTVADTIPVNHEDGVVKGHGTS
EVDGEVVATLCGVVERVNKLVYIRTLRARYKPEIGDIIVGRVIEVAPKRWRLEINFSQDA
VLMLSSMNLPDGIQVKHQFPVSSIVRGSVDKLYVIQ
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgttgagagatttacagcttccgctaaatcaaacgcagaatattaggttacag
agagctctgcagcagcttcgggaattagattccaaagccagttccttatcttctgttact
gtcgccgacaccatccctgttaaccacgaagacggcgttgtcaaggggcatggaacttct
gaggttgatggtgaagtggttgcgactctatgcggagtagtggagcgagttaacaagctc
gtctacatccgtactttaagggccaggtacaagccggagattggagatatcatcgtgggg
cgtgtcattgaagttgctccaaagcgttggagacttgagatcaattttagtcaggacgca
gtcttgatgctttcctcaatgaacttgcctgatggtatccaggtaaaacatcaatttcct
gtgtcttctatagtacgtggcagtgtagataaactttatgtaatacaatga
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