Macadamia integrifolia (macadamia nut): 122092300
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Entry
122092300 CDS
T07436
Name
(RefSeq) bromodomain and WD repeat-containing protein 3-like
KO
K11797
PH-interacting protein
Organism
ming
Macadamia integrifolia (macadamia nut)
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ming04121
]
122092300
Ubiquitin system [BR:
ming04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
122092300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
WDR55
Beta-prop_EML
Bromodomain
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_EIPR1
Auxin_resp
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
VPS8_N
Motif
Other DBs
NCBI-GeneID:
122092300
NCBI-ProteinID:
XP_042518555
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All DBs
Position
10:complement(23356047..23402062)
Genome browser
AA seq
1581 aa
AA seq
DB search
MFSVAFCKCMAFALNMALHKYVPAGDAPSLSMAPLNFSNSVHEKAQCAEAEPAACPSVDA
DVDIDLREVYFLIMHFLSAGPCHRTYGQFWNELLEHQLLPRRYHAWYSRRGARSGDENDD
GQSFPLSYNKLVERYPHVEKDHLVKLLKQLILNTAPPLHGMAGGNIPNAADVPTLLGSGS
FSLLESDRNKDKQINRLPIYLRWPHMQADQVRGLSLREIGGGFTKHHRAPSIRAACYAIA
KPSTMVQKMQNIKKLRGHRDAVYCATFDRTGRYVITGSDDRLVKIWSMETAFCLASCRGH
EGDITDLAVSSNNALVASSSNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSSVYQ
LLSSSDDGTCRIWDARNSNFSPRVYVPRPKEATTGSFCYTFAVYGKVGRWTRAYHLKVPP
PPMPPQPPRGGPRQRFLPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTG
HTESTYVLDVHPFNPRMAMSAGYDGKTIVWDIWEGTPIRIYETGRFKLVDGKFSPDGTSI
VLSDDVGQIYILNTGQGESQKDAKYDQFFLGDYRPLIQDTHGNSLDQETQLAPYRRNMQD
LLCDSSMIPYPEPYQNMYQQRRLGAFGLEWRPPSVKYAVGADISLGLQNYQMLPLADLDR
MIDPLPEFLDAMDWEPENEVQSDDTDSEYNVAEEYSSEGEQGSFGASSSTDPECSGEDSE
VELSHKDSLRRSKRKKHIEVEFMTSSGRRVKRRNLDERDGTLSRTNRAKKSRNGQKASRG
KSSTSKSSRPRRVAARNALNLFSRITGASTDGSDEDGSDDDSSESKSMNSQSYESDRSTQ
NGKYKHPREQEPFFNETEDVFKPREVPESVKHTGNGKRLVLKISKKPPADARSDIEKLVG
LVGSSSKCPPETIKAYLGSEDPSSSGHAIDTVLGSKFRARTVSERSEDHLDLPAGYIDDK
IKWGEVKARTSKRLRLGMPTDAPGSIVSHDGQYELREYRDYGDRVIEDKIESLDLCFKNG
TNHPEEAKEKNPAPSSTKLRIRTKSLSVREPESPYKQYPATGDEDWRSSACDFMSKSPSP
KELNLISGVPGENEGANGLNLEDLDGLGKSEVLIDKGFQSPVLQDSKGLHTDSNNKMCHV
VYKRSKSYKARPDSVGDGGGMGESSTNASNHFLDRRMDFTADASDGARRTRSMGMDATVW
ETNTLNHNVKAREGFGSAETSKSADKFARNKHEHLLCDEWRSHSKIPVGSRSVRNRRGNH
YDSDINPLSKRKSNHSVGKLSWLMLTAHEEFYRYIPQLADEVIYLRQGYQEFIGTYRSLE
AGLWESIKENLRAVELCKVNELDYSTLPGSGESCCKITLKFIDSTSSVFGRTFKLTLPEL
SVPDFIVERTRYDAAIKRNWTHRDKCQVYWREENGEGGNWWEGRVLAVKPKSPEFPDSPW
ERFVVSYKSDPTKPSLHCPWELHDPDIQWEHPHIDDEAREKLFTSFTKLEKLASEKKDYY
GIQKLKQVGQKSDYLNRFPVPLSLEMVQERLENNYYRSLDAVRHDISVMLSNAESYFGKN
IELLTKVRRLKDWFLRKLPLF
NT seq
4746 nt
NT seq
+upstream
nt +downstream
nt
atgttttctgtcgctttttgcaagtgtatggcttttgcactaaacatggctctacataag
tatgtcccagctggtgatgcaccttctcttagtatggcacctttgaatttttcaaatagt
gtgcatgagaaggctcaatgtgcagaggcagaaccagccgcatgtccttctgtagatgct
gatgtagatattgacctcagagaagtttactttctgattatgcattttctatcggctggg
ccatgtcatagaacttacggacagttttggaatgagctcctggaacatcaacttctacct
agaagatatcatgcttggtattcaagaagaggtgcacgtagtggggatgaaaatgatgat
gggcagtccttccccttgagttacaataaattggtagaaaggtatcctcatgttgaaaag
gatcatttggtaaagcttctaaagcaactgatactgaatacagcccctccattgcatggt
atggctggaggaaacataccaaacgcagctgatgttccaacactcttaggatctggttcc
ttctcactactggaatctgataggaacaaagataagcaaatcaaccgcctgcctatctac
ttgcgttggcctcacatgcaggccgatcaggtgcgtggtctaagtctgagggaaattgga
ggtggtttcacaaaacaccatcgtgctccatccattcgtgcagcatgttatgccattgct
aaaccatcaactatggtgcaaaagatgcaaaatataaagaagctaaggggacaccgggat
gcggtctattgtgccacattcgatcgcactgggagatatgtgattacaggttcagatgat
cgccttgtaaaaatttggtcaatggaaactgcattttgtttggccagttgccgtgggcat
gaaggggacataactgacttggctgtcagttcaaacaatgctttggtggcatcctcatca
aatgactttgtcattcgagtttggcgtttgccagatgggcttccaatttcggttttgcgg
gggcatactggagctgttaccgccattgcattcagtcctaggcctagctccgtttaccag
cttttatcgtcatcagatgatggtacatgtcggatatgggatgccagaaactctaacttc
agcccacgagtttacgttccaaggcctaaggaagccacaactggtagtttttgttataca
tttgctgtttatggaaaagttggacgctggacacgggcatatcacctgaaggttccaccc
ccaccaatgcctcctcagcctcctcgtggaggcccacgtcagagattccttccaactcct
cgtggtgttaatatgattgtctggagcctggataaccgttttgtgcttgctgccatcatg
gattgcagaatatgtgtttggaatgctgctgatggtagcctggttcattctttgactggt
catactgaatccacttatgttttggatgttcatcctttcaaccctcggatggctatgagt
gctggttatgatgggaaaaccatagtgtgggatatatgggaggggacacccatacgcata
tatgaaactggacgcttcaagttggtagatgggaaattttctccggatgggacgtccatc
gtactttcagatgatgttgggcaaatttacatattaaacacaggccaaggggagtcacaa
aaggatgccaaatatgatcagttcttccttggggattatcgtccccttatccaagacacc
catgggaattctcttgatcaggagactcaacttgctccttatcggaggaatatgcaggat
ctcctctgcgattcaagcatgattccttatccagaaccttatcagaatatgtaccagcaa
cggcgactaggtgcttttggtttggagtggcgtcctccttctgtaaaatatgctgttgga
gcagatatcagccttggactccaaaattaccaaatgctgccattggcagacttggataga
atgattgatccattaccagagttcttagatgccatggattgggagccagaaaatgaagtc
caaagtgatgatactgattcggaatacaatgttgctgaggagtattcaagtgaaggggag
cagggaagctttggtgccagctcttcgactgatccagagtgcagcggagaagacagtgag
gttgaactcagccacaaagacagccttcgcagatcaaaaagaaaaaaacacatagaagtt
gaatttatgacttcttctgggaggcgtgtcaagaggaggaatttggatgagcgagatggc
actctatctaggactaacagggctaagaaatcaagaaatggccagaaagcttcaaggggg
aagtcctctacttcaaaatcatcacgtcctcgtagagttgctgcacggaatgctcttaat
ttgttttctcgaatcactggagcttcaactgatggctcagacgaagatggctcagacgat
gattcatctgaaagtaaatcaatgaacagccagagctatgaatctgatagatccacgcag
aatgggaagtataaacatcctagagagcaagaaccattttttaatgagactgaagatgtg
ttcaaacctcgtgaagttcctgaatctgttaagcatacaggaaacgggaagaggttagtc
ctgaaaatatcgaagaagcctccagcagatgcaagatctgatattgaaaaactggttggt
ttagtgggttcatcatccaaatgtcctccggaaactattaaagcatatttaggctctgaa
gatccaagttcatctggccatgcaattgacactgtgcttggaagtaaattcagagcaaga
acagtttctgaaaggtctgaggaccatttggacttgcctgcagggtacatagatgacaaa
attaaatggggcgaggtcaaggcacgcacatccaagcgtttgagattaggcatgccaact
gatgcccctggatctattgtgagtcatgatggccaatatgagcttcgtgaatacagagat
tatggtgacagggtaatagaagataaaattgaatctttggacttgtgctttaagaatgga
accaatcaccctgaggaagcaaaagagaaaaatcctgcacccagttctaccaagttaagg
ataagaacgaaaagtttgagtgtgagggaacctgaaagtccttacaagcaatatcctgct
acgggggatgaggattggagaagttctgcatgtgatttcatgtccaaaagtccttcaccc
aaggaactgaacctaatttcaggagtgcctggtgagaatgaaggtgctaatggactcaat
cttgaggacttggatgggttagggaaatcagaggttttaattgacaaaggctttcagtca
cctgttttacaagattcgaaggggttgcatacagattcaaacaataagatgtgtcatgtc
gtttataaaagatcgaagtcatataaggctagacctgattcagtaggtgatggtggtggt
atgggagaaagttctactaacgcaagcaaccattttcttgaccgaaggatggacttcaca
gcagatgcatctgatggggcccgtagaacaagatccatgggaatggatgcaactgtttgg
gaaactaatactctgaaccataatgtcaaagcgagggaaggttttgggtcagcagaaaca
tcaaaaagtgcagacaagtttgccagaaacaagcatgagcatctcctatgtgatgagtgg
agatcacattcaaaaataccagttggttcaaggtctgttaggaacaggagaggcaaccat
tatgatagtgacataaatcctctaagtaagaggaagtcaaatcattcagtggggaagctt
tcttggttaatgttaacagcgcatgaagagttctaccgatacattcctcagttggcggat
gaagtcatatacttgagacagggctatcaagaatttattggaacttatcgttcattagaa
gcaggtctgtgggaatcaatcaaggaaaatttgagagcagtggaactttgtaaagttaat
gaacttgattactccactcttccgggatctggagagagctgctgtaaaatcacactcaaa
ttcatagattcaacttcgagtgttttcggtagaacattcaagttgacgctgcctgaattg
agtgtcccagactttattgttgaaagaacacggtatgatgcagcgatcaagagaaactgg
acacatagggataaatgtcaggtatattggagagaggagaatggagaaggtgggaattgg
tgggaaggtcgggttctggctgtaaaacccaagtctccagagtttccagacagtccatgg
gaaagatttgttgtttcatacaagagtgatcctaccaaaccgagtctacattgcccttgg
gaactgcacgatcctgatattcaatgggaacacccacatattgatgatgaggccagagaa
aaactgtttacttctttcacaaagttagagaaattagctagtgagaaaaaggactattat
gggattcaaaaattgaaacaggttggacagaagtcagattatttaaacaggtttccagtt
ccactgtccctggaaatggtccaggaaaggttggagaacaattattatcgtagcttggat
gccgtgaggcatgatatttcagtaatgctgtccaatgccgaatcctactttgggaaaaat
atagaacttttgactaaggtgaggcggctaaaagactggttcctacggaagctgccattg
ttttag
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integrated database retrieval system
