Macadamia integrifolia (macadamia nut): 122092714
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Entry
122092714 CDS
T07436
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1A-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming04120
Ubiquitin mediated proteolysis
ming04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122092714
04120 Ubiquitin mediated proteolysis
122092714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ming04121
]
122092714
Enzymes [BR:
ming01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122092714
Ubiquitin system [BR:
ming04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122092714
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
zf-RING_Vps41
FlxA
zf-RING_16
zf-RING_5
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
122092714
NCBI-ProteinID:
XP_042518890
LinkDB
All DBs
Position
11:<21423469..21429405
Genome browser
AA seq
369 aa
AA seq
DB search
MILATTTVSTFVKYVFYVSDMLMEGQWEKKAVYTFYLELIRDLLHLSMYLCFFLVIFMNY
GVPLHLIRELYETFRNFKVRVSDYMRYRKITSNMNDRFPDATPEELTASDATCIICREEM
VTAKKLLCGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTTASGGQHGVRSEVHQQGMG
AASTSAQGSEGGATNDNLKQHQTRLQAAAAAAAVYEKSFVYPSANTFVWSPGYAVLPQMH
IPSADSSSMDSTGERAPFGHTQQDQFAIPGSVPNYAFMPFQAPGANPPSSETLGCNLNMP
ASYMEAQQRFLQHQIEVLQNQLKCLQQQRPEESMNMGPTVSDSRGKATASSSSAISDCGH
HGEIEEADD
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgatactggcaacaacaacagtgtctacatttgtgaaatatgttttctatgtcagtgac
atgttgatggaaggacaatgggagaaaaaggctgtctacaccttctatttggaacttatt
cgtgacctgcttcacttgtctatgtatctatgcttcttccttgtgattttcatgaactat
ggtgtgccattgcacttaattcgagaactctatgagaccttccgcaacttcaaggtccga
gtttctgattatatgcgttatcgcaaaatcacttcaaatatgaatgaccgtttcccagat
gcaacacctgaagagctgactgcaagtgacgcaacatgcatcatttgtcgtgaggagatg
gtgacagcaaaaaagctcctttgtggacacctttttcatgtgcattgcctccggtcatgg
ttagagcggcaacatacttgccctacatgcagagcacttgtggttcctcctgaaaatggg
acaactgcatctggagggcaacatggagtcaggtctgaggttcatcagcaaggaatgggt
gctgcaagtacttctgctcagggctcagaaggtggtgcaactaatgataatttaaagcag
catcaaaccagactccaagctgctgctgctgctgctgcagtatatgaaaaatcttttgtt
tatccttctgcaaatacattcgtatggtccccaggatatgctgtacttcctcagatgcat
atcccttcagcagactcgtctagtatggattcaactggagaaagagctccttttggacat
acacagcaggaccaatttgcaatcccgggtagtgttcctaactatgctttcatgcctttc
caagcacctggtgccaatcccccttctagtgagacattgggctgcaatttaaatatgcca
gcttcatatatggaagctcagcagagatttctccagcatcagattgaggtcctacaaaat
cagctgaagtgtctacagcaacagagaccagaagaatccatgaacatgggtccaactgta
tcagatagcagaggcaaggctactgcatcttcatcatcagccatttctgactgtggtcat
catggggagattgaagaggctgatgattag
DBGET
integrated database retrieval system
