Macadamia integrifolia (macadamia nut): 122093014
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Entry
122093014 CDS
T07436
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, chloroplastic
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122093014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ming03019
]
122093014
03016 Transfer RNA biogenesis [BR:
ming03016
]
122093014
Enzymes [BR:
ming01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
122093014
Messenger RNA biogenesis [BR:
ming03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
122093014
Transfer RNA biogenesis [BR:
ming03016
]
Prokaryotic type
tRNA degradation factors
122093014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
Motif
Other DBs
NCBI-GeneID:
122093014
NCBI-ProteinID:
XP_042519221
LinkDB
All DBs
Position
11:24703707..24784492
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AA seq
693 aa
AA seq
DB search
MLVNPIFNARPTPHPPPPPPPFLHSIRSRSLLPPFCAGFRRSGKLQFCSFTSVPSRNTKR
YRVKALKKPNDSGATDEVTNRTQRIPQPFSVKIPVGDRHILVETGLIGRQASGAVTVTDG
ETIVYTSVCFADVPSEPSDFFPLSVNYQERFSAAGRTSGGYYKREGRAKDHEVLICRLID
RPLRTTMPKGCHHETQILSWVLSYDGLHSPDSLAVTAAGIAVALSEVPNSKAVAGVRIGL
VNDKFLVNPTTREMEDSELDLIIAGTDSAILMIEGYCNFLPEEKLLQAVEVGQDAVRAIC
SEVEVLVRKCGKPKMIEAIKLPPSELYRHVEEIAGDELVKVLQIRDKIPRRKALSALEEK
VLAILTEKGYVNKDEALTAAETTPDLLEDEEEDEEVVVDGEVDEGDVHIKPVSRKHFPLF
FSEVDVKLVFKEVTSKFLRRRIVEGGKRSDGRSPSGIRVINSRCGLLPRVHGSSLFTRGE
TQALAVVTLGDRQMAQRLDNLVDVDESKRFYLQYSFPLSCVGEVGRIGAPSRREIGHGML
AERALEPILPSEEDFPYTIRVESTITESNGSSSMASVCGGCLALQDAGVPVKCSIAGVAM
GMVLDTKEFGGDGAPLILSDITGSEDASGDMDFKVTGDENGITAFQMDIKVGGITLPIMK
EALLQAKDGRKHIIGIISSICILNRLYIVQYQC
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgttagttaaccctatcttcaatgccaggcctactcctcatcctcctcctcctcctcct
ccatttctccactccatacgaagcagaagtcttctccctccattttgcgccggttttcgc
cgttcaggaaaacttcagttttgttcattcacttcagttccgtcaagaaacacaaagaga
tatcgggttaaagcattgaagaaaccaaatgattcaggtgcaacagatgaagttaccaat
agaacacagcgtattccgcagccgttctccgtcaagattcctgttggtgacagacatatc
ttggttgagactggtcttataggaagacaagctagtggggctgttaccgtgacagatggg
gaaactattgtctacacatctgtttgcttcgctgatgtcccaagtgagccttctgacttt
tttcctctctcagtaaattatcaagagcgtttttctgcagcgggccggactagtggaggt
tattacaagagagaagggagagctaaagatcacgaggttctcatttgtaggttgatagat
aggcctttgcgcacgacgatgccgaagggctgccaccatgaaacacagatactctcttgg
gttctgagctacgatggcctgcattcccctgattccctggcagtcactgcagctggaata
gcagtagctctttcagaagtgccaaactcaaaagcagttgcaggagttcgaattggcctt
gttaacgataagttcctagtgaatccaactaccagagaaatggaagattcggaattggac
ttgataattgctggcacagatagtgcaatattgatgatagagggttattgtaattttctt
ccagaggagaagttgctgcaagctgttgaagttgggcaggatgctgtacgagcaatttgc
agtgaggtggaagttttagttaggaaatgtggaaaacctaagatgattgaggcgatcaaa
ctacctccttctgagctatataggcatgttgaagaaatagctggtgatgaacttgtaaaa
gtattacaaattagggataaaatacctcgaagaaaggccttgtctgccctggaagaaaaa
gttttagcaattcttacagagaaagggtatgtcaataaggatgaagctttgacagctgct
gaaacaacaccagatttattagaggatgaagaggaggatgaggaagtggttgtggatggt
gaagtagatgaaggtgatgttcacatcaagccagtttcccgcaaacacttccccttgttt
ttctcagaagtggatgtaaagctggtttttaaggaagttacatccaaattcctgcgcaga
cgtattgtggagggaggaaaacgaagtgatgggcggagcccttctggaatacgagtgata
aactccaggtgtggattgcttccaagagtacatgggagttcactgttcactcgtggcgaa
acacaggcacttgcagtggttactcttggtgacagacaaatggcacaaagattagacaac
cttgttgatgttgatgagtcaaaaaggttctatcttcagtattcatttccactgtcatgt
gttggagaggttgggcgcataggagcacctagtagaagagaaataggtcatggaatgctt
gccgaaagagcacttgaacctattttgccttccgaagaggatttcccctacaccatacgt
gtggagagtaccattactgaaagcaatggttcatcaagtatggcatctgtctgtggaggt
tgcctagctttacaggacgctggcgttcccgtgaagtgctctattgccggggtagcaatg
ggtatggttttggacacaaaagaatttgggggagatggtgctccacttattctctctgac
attactggatctgaagatgcttctggagatatggattttaaggtcactggagatgagaat
ggtataactgcatttcagatggacataaaggtgggaggaattacactacccattatgaaa
gaagcacttctgcaagcaaaagacgggcgaaagcatattataggtataatctctagtatt
tgcatattgaatcgactctacattgtgcaatatcagtgttaa
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