Macadamia integrifolia (macadamia nut): 122093290
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Entry
122093290 CDS
T07436
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122093290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ming03019
]
122093290
Messenger RNA biogenesis [BR:
ming03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122093290
mRNA degradation factors
5'-3' decay
Decapping complex
122093290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EDC4_C
Ge1_WD40
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_EML_2
Spo0A_C
Beta-prop_RIG_2nd
Sey1_3HB
DUF445
Motif
Other DBs
NCBI-GeneID:
122093290
NCBI-ProteinID:
XP_042519508
LinkDB
All DBs
Position
11:33351148..33368515
Genome browser
AA seq
1417 aa
AA seq
DB search
MASAGNPNQPATFDMQKLFKPSTNPSPSNPSNPNSSQFPVSSYPQPPSSYPPPTGPFSYP
PQTAPFHHPHYLPPYTQEQLSGVLHQRPISYATPHLQPPPLLSSPLASPNPNHGARLMAL
LGTSAPPNMELPAPTMPSPSTASSMPAASEFPLHTNPPILPSMPSAPPINTAAPQPSPIR
LPSSKLPKGRHLIGDNVVYDVDVRLQGEVQPQLEVTPITKYVSDPGLVVGRQIAVNRTYI
CYGLKLGAIRVLNINTALRSLLRGHTQRVTDMAFFAEEVHLLASASIDGRVFVWKINEGP
DEEDKPQITGKIVIAIQIIGGGDSIHPRVCWHSHKQEILVVGIGKCLLKIDTTKVGKGEV
FSAEDPLKCPIDKLIAGVQLVGEHDGDVTELSMCQWMTSRLASASTDGTVKIWEDRKTLP
PVVLRPYDGHPVNSVTFLTAPNRPDHINLVTAGPLNREVKIWASASEEGWLLPSDAESWR
CTQTLELRSSEEPRIEEAFFNQVVALPRASLILLANAKKNAIYAIHIEYGPNPISTRLDY
IAEFTVTMPILSLTGTSDYISEREHVVQVYCVQTQAIQQYALDLSQCFPPPLENMGLEKT
ESSASRSLDTPISDGLATSDPSNLGTSTEIPVGNAAPKPTVLVSSSESVPAARYPIISDS
AEVPSLHELVSSSIESKPSALLPATSEADNIHVVAQPVPLSPRLSGKLSGFRTPSNCFEP
GSQLDRGGDLPVQDYSVDRRVDNVITSLPDIPSLDEISRKDESKVAQNDITVMSNPPVMF
KHPTHLVTPSEIFSMAVPPSENSQVSQGMKRGEAKVQDVVVNNDTGSVEVEVKVIGETGS
SQNDEFDSQKEPHILLAEKREKSFCSQSSDLSMEMTRDCCETFGVEETRQVDDSCVTEVV
DRPPNAGDEEFQDSSKEAHGKVSESTAAATVPQTPSPATKGKKQKGKNSQVAGPSSASPS
PFNSTDSSNEPGSSGVPSTEAAVAQIMAMQETLNQLMTMQREMQKQLSVMVAVPINKEGR
RIEAALGRSVEKVVKANNDALWARLQEENAKHEKLERDRSQQLTSVTTNFMNKDLPAMLE
KTLKKEMSSVGPVVARAITPVVEKTLSSVVAEAFQRGVGDKAVSQLEKSVNSKLEATVAR
QIQAQFQTTGKQALQDALRSTFEASVIPAFEMSCKVMFEQIDAAFQKGMVEHATAAQQQF
ESAHSPLAIALRDSINSASSITQTLTGEIADGQRKLLALAAAGANSKAVNPLVTQLSNGP
LGGLHEMPMSVQQVEAPLDPTKELSRLISERKFEEAFIAALHRSDVSIVSWLCSQVDFKG
ILSMVPQPLNQGVLLSLLQQLACDISNETSRKLAWMTDVLVAINPADSMIAMHVRPIFEQ
VYKILAHHSTLPTVTSNDVTSMRIVMHVINSMLMTCK
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgccgggaatccaaatcaacctgcgacctttgatatgcagaagctcttcaaa
ccctcgacaaacccttctccctcaaaccctagtaatccaaactcgtcacaattcccagtg
tcttcatatcctcaaccaccttcttcttatcctccacccactggccctttctcctaccca
ccccagactgctccattccatcatcctcactatctccctccttacacacaggagcagctc
tctggggtgctccaccagaggcccatttcctatgctacaccccatctccagccacctcct
ctcctttcctctccccttgcctctcccaatcccaaccatggagccagactcatggctcta
ctaggcaccagcgctccacccaacatggaattgccggcaccgacaatgccttcaccatct
actgcgtcttcaatgcctgctgcatcagaattccccttgcataccaatccccccatattg
ccttcgatgccttcggcaccacccatcaacacggcggctccccagccgtccccaataagg
ttaccgagcagtaaactcccaaagggccgacatttgattggtgacaacgtagtgtatgac
gttgacgtacggttgcagggcgaggtccagccccagctcgaggtcaccccaatcactaag
tatgtctccgatccgggacttgtcgttggccggcagattgcggttaacaggacgtatata
tgctatggactgaagttgggggctatccgggtcctcaatataaacactgccttgagatct
ttgcttcgaggtcacactcagagggtcacagacatggctttctttgctgaggaagttcat
cttttagccagtgcaagcatagatgggagggtttttgtttggaagattaatgaaggtcca
gatgaagaagataagccacaaattactggaaaaattgttattgccattcagataattgga
gggggggattcgatacatccacgggtctgttggcactcacacaaacaggagattttggta
gtaggtattggaaaatgtttgctgaaaattgatacaacaaaagttggaaaaggtgaagtg
ttttcagcggaagatcctcttaagtgtcctattgataagctgattgcgggtgttcagctt
gttggtgaacatgacggggatgtgactgagttgtcaatgtgccaatggatgaccagccgc
ttagcttctgcatcaacggatggcacggtaaagatatgggaagaccgtaagacactgccg
cctgtggtattgaggccatatgatggtcatccagttaactcggtcacattcttaactgca
cctaaccgccctgatcacattaatcttgtcacagcggggcctctgaatcgggaagtgaag
atatgggcctcagcaagtgaagaaggttggctgttacctagtgatgctgaatcttggcgg
tgtactcagacattggagttaaggagttctgaggaaccccgaattgaggaggcattcttt
aatcaagttgtagccttgccacgtgcgagcctcattcttcttgcaaatgccaagaagaat
gctatatatgccatacacatagaatatggcccaaatccgatctcaacgcgcctggattat
attgcagagtttactgtcacaatgcctattttgagtcttactggtacgagtgactacata
tccgaaagggagcatgtggttcaggtttattgtgtccagacacaggctattcaacagtac
gctctggatctttcccagtgcttccctccgccactggagaatatgggattagaaaagaca
gagtctagtgcttctcgttctctagatacacctatttctgatggattggctacatcagat
ccatctaatctgggtacatctactgagatccctgtaggaaatgctgcacccaaaccaact
gtcttagttagcagttctgaaagtgtacctgctgccaggtatcctataatctcagattcc
gctgaggttcctagcttacatgaattggtatcatcaagtattgaatctaaaccaagtgct
ttactgccagcaacctctgaggccgataacatccatgttgtggcacagcctgttcctttg
agtccgaggttatcagggaaactatccggttttagaactccatcaaattgctttgagcct
ggttcccaactagatcggggcggtgacctgccagttcaggattattcagtagataggaga
gtggacaatgttattacaagtttaccagatattccttctttggatgaaatctctaggaag
gatgaaagcaaagttgcacagaatgacattactgtaatgtctaatcctcctgtgatgttc
aaacatccaacccatttggtaactccatcagagatattttcgatggctgttccaccctct
gagaatagtcaggtcagtcaaggaatgaagaggggtgaggcaaaggtacaagatgtggtt
gtcaacaatgatacaggtagtgttgaggtagaggttaaagtcattggtgagactgggtca
agtcagaatgatgagtttgattcccagaaagaaccacacattcttcttgcagagaaaagg
gagaaatccttctgctcccagtcgtcagatctcagcatggagatgaccagggactgctgc
gaaacttttggtgtggaggagactcggcaagtcgatgattcttgtgttactgaagtggta
gaccggcctccaaatgctggtgacgaagaatttcaagattcctcaaaagaagcacatgga
aaggtttctgaatcaactgcagctgcaacagttccacagactccatcacctgctacaaaa
gggaagaaacagaagggtaaaaactctcaagtagccggaccctcatccgcttctcccagc
cctttcaattcgacagattcttccaatgaaccgggtagttctggtgttccttctacagag
gctgctgttgcacaaatcatggccatgcaagagacattgaaccagctaatgaccatgcaa
agagaaatgcagaagcagttgtcagtgatggtggctgtcccaatcaacaaagagggcaga
agaattgaggcagctctgggcaggagcgtagagaaagttgttaaggccaacaatgatgct
ctctgggctcggcttcaagaggagaatgcaaagcatgagaagctggaacgtgaccgttca
cagcagttgactagtgtcaccaccaactttatgaataaagacttgccggccatgctagag
aaaacattgaagaaggaaatgtcttctgtaggaccagttgtagctcgtgctattactccg
gttgtggagaaaacactttcttcagttgttgcagaggcattccagagaggggttggagac
aaggctgtgagtcagttggaaaaatcagttaattcaaaactggaagcaacagtagctagg
caaatccaggctcaattccaaactactggaaagcaagctcttcaggatgcattaaggtct
accttcgaagcttcagtaattccagcatttgaaatgtcatgcaaagtcatgtttgagcaa
attgatgctgcatttcagaaagggatggttgaacatgcaactgcagctcagcagcagttt
gagtctgcacattccccgctggctattgctttaagggattcaattaattcagcatcatca
attactcaaaccttgactggagagattgctgatggccagcgtaagcttttagctcttgca
gctgcaggagcaaactcaaaggcagtaaatcctttggttacacaactaagcaatggtcct
ttaggtggtctccatgagatgcccatgtctgtacagcaggttgaggcacctttggatcct
accaaagagctatcgagattgatatctgaacgcaaatttgaggaagcatttattgcagct
ttgcatagaagtgatgtttctattgtatcatggctttgttctcaggttgattttaaaggt
atattatcgatggtgcctcagcctctgaatcaaggagttctactgtcccttctccagcag
ttagcttgtgatatcagcaacgaaacatcacgaaaactggcatggatgactgacgttctt
gttgccataaatccagccgactcgatgattgcgatgcacgtgaggccaatttttgagcag
gtctataaaatactggcccatcacagcaccttaccaactgtgacttccaatgatgttaca
agcatgcggatcgttatgcacgtcatcaattccatgctgatgacctgtaaatga
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integrated database retrieval system
