Macadamia integrifolia (macadamia nut): 122093291
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Entry
122093291 CDS
T07436
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03020
RNA polymerase
ming03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122093291
09124 Replication and repair
03420 Nucleotide excision repair
122093291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ming03021
]
122093291
03400 DNA repair and recombination proteins [BR:
ming03400
]
122093291
Enzymes [BR:
ming01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122093291
Transcription machinery [BR:
ming03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
122093291
DNA repair and recombination proteins [BR:
ming03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
122093291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-GeneID:
122093291
NCBI-ProteinID:
XP_042519511
LinkDB
All DBs
Position
11:23528442..23536153
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AA seq
842 aa
AA seq
DB search
MLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRM
LFRKLTRDVRAYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVS
QVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLA
LMVYITVGSAAQPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVTTL
RKLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVDNQRLLIKKKDVRSLQQRES
PDDGGWHDLVAKGFIEYIDTEEEETTMISMTINDLITARLHPEEAYSETYTHCEIHPSLI
LGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRA
MEHLHFRQLPAGINSIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGT
LVKEDFGRPNRENTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDESQGQAS
RYTRRDHSTSLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTV
GMTYTQEDMPWTVEGISPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDV
TVDNISKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGP
VQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIA
IANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLTSELKTIKDKKKVV
LN
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctcatgttggtgttggagaatattgtgaaacgaagaaggcttattattttggg
tacatcattcacaggcttctactatgtgcacttggccggagggcagaagatgatagggat
cattatggcaacaagaggctagaccttgctggacctttgcttggaggcctgtttcgcatg
ctgttcagaaagttgacgagggatgttagagcatatgttcagaagtgtgttgataatggg
aaggatgttaacttgcaatttgctataaaagcaaaaacaatcacgagtgggcttaaatat
tcccttgctacagggaactggggacaagcaaatgctgctggtacaagagctggagtttca
caggttttgaaccgtttgacatatgcatctactctgtctcacttgcgaaggttaaactct
cctattgggcgtgaagggaaattggcgaaacctaggcaattgcacaattcccattggggg
atgatgtgtcctgcagaaactccagaaggacaggcttgtggacttgtgaagaatttggcg
ctaatggtgtacataactgtgggatcagcagcccagcccatactcgagtttttggaagag
tggagtacagaaaattttgaggaaatatcccctgctgttattccacaagcgaccaaaatt
tttgtcaatggttgctgggttggcattcatcgtaatcctgagcttttggtgacgacgttg
agaaagctaagaagacaggttgatgtcaatactgaagttggtgttatccgagatattcgt
ttgaaagagcttcgactttatactgattatggccggtgtagccgtcccttgtttattgtc
gataatcaaaggctacttataaagaaaaaagatgtccggtcgttgcaacaaagggaatcc
ccagatgacggcggctggcatgatcttgtggcaaaaggattcatagagtatatagacaca
gaagaagaagagactactatgatttccatgactattaatgatcttataactgcaaggctc
catcctgaggaagcttattccgaaacttatactcattgtgaaatccatccatcgttgatt
ttgggcgtctgtgcatctattattccatttcctgaccataaccagtcccctcgtaatact
taccagtcggcaatgggcaaacaagccatggggatttatgtcacaaattaccaattgcga
atggatacactggcctatgtgctctattacccccagaaacctcttgtaactactcgtgcc
atggagcacttacacttcaggcagttgccagctggaattaattctatcgttgctatctct
tgctattccggatataaccaagaagattctgttatcatgaaccaatcttcaattgaccgg
ggattcttccgatcattgttcttccggtcatacagggatgaggaaaagaagatgggaaca
ttagttaaggaggattttgggcgtccaaacagggaaaatacaatggggatgcgacatgga
tcttatgataaattagatgatgatggtcttgcccctcctggcacaagggtctcaggtgaa
gatgttattattggaaagacaactccaattgctcaggatgaatctcaagggcaagcttca
aggtacacacgccgtgatcatagcacaagtctaaggcacagtgaaagtgggatggtagat
caggttctgttgacaacaaatgctgatggtttgaggtttgtgaaagtacgaatgaggtct
gtccgtatacctcagattggagacaagttcagcagtcggcatggtcagaagggaacagtt
ggtatgacatacactcaagaagacatgccatggactgtggaaggaatttccccagatatt
attgtgaacccacatgctattccttctcgaatgacaattggccagctcatagagtgcatt
atggggaaggttgcagctcacatggggaaggagggggatgctactccttttactgatgtc
acagtggacaatatcagcaaagccctccacaaatgtgggtatcagatgcgtggttttgag
accatgtacaatggtcatacaggccggaggctgactgcgatgatattcctgggtcctaca
tactatcaaagactgaagcacatggtggatgataagatccattcacgtgggcgtggtccc
gtgcagattctcacaaggcagcctgctgaaggacggtctcgagatggaggtctccgattt
ggggagatggagcgagattgtatgattgctcatggggctgcacattttctcaaagagcgg
ttgtttgaccagagtgatgcctatagagttcatgtttgtgagcgttgcgggctgattgct
attgccaacctaaagaagaactcgtttgagtgtagaggttgcaagaacaagactgacatt
gttcaggttcacataccttatgcgtgtaagttgcttttccaagaactcatgtcgatggcc
attgccccgaggatgctcacaagtgaattgaagacgatcaaagataagaagaaagttgtt
ttgaactga
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