Macadamia integrifolia (macadamia nut): 122093295
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Entry
122093295 CDS
T07436
Name
(RefSeq) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122093295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ming03400
]
122093295
DNA repair and recombination proteins [BR:
ming03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
122093295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
DUF4743
AAA_22
BBS7_CtH
Motif
Other DBs
NCBI-GeneID:
122093295
NCBI-ProteinID:
XP_042519513
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All DBs
Position
11:24457403..24485419
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AA seq
913 aa
AA seq
DB search
MELCNCFISINKRPPNFFHTVVRGSIRSSASTSNGHETTRVKLAEELQRETERTLEWQSV
CLQVSNFTSTSMGLTIARNGNLPFGRSREESQKLLNQTTAALLLPRPLNFSGIEDISDIV
SSSVLRQLRTINELCAVKSTLRSARELYLQLKELSLDGDSIDRYSPLLEILDNCDFVTDL
EQKIGFCIDCNLSVILDRASEDLEIIRLERKRNMENLESLLKEVSTKIFQAGGIDTPLVT
KRRSRMCVGVRASHKFLLQDGVVLDISSSGATYFMEPRDAVELNNMEVRLSSSENDEKLA
IISLLTSEIAESERKIKYLLERILEVDFAFARASYAQWMNGVCPILGPEGSNGSQPNKTE
NSLSVDIEGIQHPLLLESSLRSLSTDPVLESGSSIGLDRGNRAIDPGRLSEGGSDFPVPI
DIKVRHTVKVVVISGPNTGGKTASMKTLGLASLMSKAGMYLPAKNYPRLPWFDLVLADIG
DHQSLEQNLSTFSGHILRICKILEVTSKQSLVLIDEIGNGTDPSEGVALSASILQYLKDR
VNLAVVTTHYADLSSLKDKDPQFENAAMEFCLETLKPTYHLLWGSKGDSNALSIAKSIGF
DQKVLDRAQKWLERLEPNNQTERKALLYQSLLKDRSMLEARARRAASLHSEIMELYHEIQ
GEAEDLDRRLVALKAKETLKVRHDVKAAKSQIDAVVQNFENQLRSASPDQFNILTRKSEA
TIASIVEDHCRSNGFAIEETNCSSYMPQIGEQVHVMGLGDKLATVVEAPGDDGTILVQYG
KMRVRVKQNSIKAPPSRETASSATRRKRQGQPRRIHKETAAEANKGEEFSYGPVVQTSKN
TLDLRGMRVDEASRNLNMAIAASRSRTVLFVIHGMGTGVVKEQTLEILRNHPRIAKFEQE
SPMNYGCTIAYIK
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggaactctgcaactgtttcatttccattaacaaaagacctccaaatttcttccacaca
gtcgttcgaggttccatcaggagctcagcttcgacctctaatggtcacgaaactacaagg
gttaagttagcagaggaacttcaaagggagacggagagaactctagaatggcaatccgtc
tgtctacaagtatctaatttcacttctactagtatgggtctcaccattgctcgaaacggg
aatcttccttttggtcggagccgggaagaaagccagaagctgttgaatcagacgacggct
gcgctgctccttcctcggccattgaacttttcgggaatcgaagacatatcggatattgtg
agttcctctgtattgcgacaattgaggacaattaacgagttgtgtgcggtcaagagtact
cttcgatctgcaagggagttatatctgcagttgaaggagttatcattagatggtgattct
atagataggtactcaccgctgctggaaatacttgataattgcgatttcgtgacagattta
gagcagaaaatcggattctgcattgattgtaatctttcagtaattcttgaccgggctagt
gaagatttggaaatcattaggttagaaagaaagaggaatatggagaacctagaatctcta
ctgaaggaagtctccactaagattttccaggctggaggaattgacaccccattggttacc
aagcgtcggtcgaggatgtgtgttggtgtcagggcttcccataaatttctgcttcaagat
ggtgtggttctggacattagcagctctggagcaacatactttatggagccaagagatgca
gtggagttgaacaacatggaagtaaggctttcaagctctgagaatgatgagaagctagca
attattagtttgcttacatctgaaatagcggaatcggaaagaaagattaaatatttgttg
gagagaattcttgaagtggattttgcttttgctagagcttcttatgctcagtggatgaat
ggggtctgcccaattttaggtcctgaggggagtaatggctcccaacctaataaaactgag
aattctttatcggtagatattgaaggtattcaacatcccttgctcctcgagtcctctcta
agaagcttgtccactgacccagtattagaatcagggagttcaattggattggataggggg
aatagagcaattgatccaggaagattgtcagaaggtggatctgactttcccgtgcccata
gatatcaaggtcaggcatacagttaaggtggttgttatctcaggaccaaatactggaggc
aaaactgcttcgatgaagactctggggttggcctcccttatgtcaaaggctggcatgtat
ttgcctgctaaaaactacccaaggcttccttggtttgatcttgttctggcagatatcggg
gatcaccagtcattggagcaaaatctctccaccttcagtgggcacatcttacgtatctgt
aaaatactggaagtgacctccaaacaatcacttgttctcattgatgaaattgggaatggg
actgatccttcagaaggcgtggctctttcggccagcatcttgcagtatctcaaagatcgg
gtcaacttagctgtggtgacaactcactatgcggatttaagttctttaaaagataaggat
cctcagtttgagaatgctgcaatggagttttgcctggagactttgaagcctacctatcac
ttactctggggaagcaaaggtgattccaatgctttgagtatagcaaaatcaattggcttt
gatcaaaaagtgcttgatcgtgcacaaaagtggctggaaagacttgaacccaacaaccaa
acggaacgaaaagctttgctttatcagtcactactgaaggaccggagcatgttggaagct
cgggccaggagagctgcttctcttcattcagaaattatggagctttatcatgagatccaa
ggtgaggctgaagatcttgatcgacgtctggtagctctaaaagcaaaggaaaccctgaaa
gtcagacatgatgtgaaggctgcaaaatctcagatagatgctgtggtccagaacttcgag
aaccaactcagaagtgcaagtcctgatcagtttaatatattaacaaggaaatcagaagct
actattgcatccattgttgaagaccattgtagaagtaatggtttcgcaattgaagaaacg
aattgtagttcttatatgccacaaattggagaacaagttcatgtaatgggattaggagat
aagttggccacagtggttgaagcacctggggatgatgggaccatcctagtccaatatggg
aaaatgagggtccgtgtgaagcagaatagtattaaagctcctccaagtagggaaactgct
agctcagccacacgccggaaaaggcagggtcagcctcgtagaattcacaaggagaccgct
gcagaggcaaacaaaggtgaggagttttcttatgggccggtggtacagacgtcaaagaac
actttggatctacgtggaatgcgggttgatgaagcttctcgcaatctcaacatggctatt
gctgcaagtagatctcgtacagttctctttgtcattcatggtatgggtacgggtgttgtt
aaggagcaaacacttgagatactacgcaaccatccacgcattgccaagtttgaacaagaa
agtccaatgaattatggttgtactattgcttacatcaagtag
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