Macadamia integrifolia (macadamia nut): 122093317
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Entry
122093317 CDS
T07436
Name
(RefSeq) protein SPA1-RELATED 4-like isoform X1
KO
K26557
protein SPA1-related 3/4
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
122093317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ming04121
]
122093317
Ubiquitin system [BR:
ming04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
122093317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Pkinase
Beta-prop_CAF1B_HIR1
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
WD40_RFWD3
PK_Tyr_Ser-Thr
Beta-prop_WDR75_1st
Beta-prop_DCAF12
WDR54
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
122093317
NCBI-ProteinID:
XP_042519543
LinkDB
All DBs
Position
11:complement(22525882..22542074)
Genome browser
AA seq
909 aa
AA seq
DB search
MMEGSSESPWQKSESSRELNACVVSSESLGLVHANPVGVSGDASNNASSVRCTPWDKGID
RGFLPHSDHLDNQVGSSGVCGDAEGVGDVAHAVERDDISLRQWLDKPDRSVDLSECLHML
RQIVETVNLAHAQGVVVHNVRPSCFVMSSFNSVSFIESASCSSSGSDSYGDAVNNQTVGG
QSCSSPSAQDLPCGRSGVGVEDSLLEISRAGASYRASETSCLQSGSANLTRLSSIEEREE
NKIEGSRKVEDAEENKKTFPLKQILLMEANWYTSPEEVAGASSSFSSDIYRLGVLLFELF
CPFSSMEEKLRTMSNLRHRVLPPQLLLKWPKEASFCLWLLHPQPSTRPKMSDVLQSDFLN
EPRNNLEERQAAISLREEIEEEELLLEFLLQMQQRKQEASDKLHHTIDCLSSDIEEVLKQ
QSILKKKGDFYLEPNLDDNSALEKVDHRSLNLARDEGSAGLGSRKRFRLGLRVSDEEELN
ENQGEVQKPENLESILSKSSRLMKNFKKLEAAYFSTRCRLMKPTMKPPTRCLPISSSGRG
SIVVTEGSSVDNVAFKEGFGEGNKSGWINPFLDGLCKYLSFSKLKVRAELKQGDLLNSSN
LVCSLSFDRDGEFFATAGVNRKIKIFECDMILNEDRDIHYPVIEMASRSKLSSICWNSYI
KSQIASSDFEGIVQVWDATRGQVFMEMREHEKRVWSVDFSLADPTKLASGSDDGAVKLWN
INQRGSVSTIKAKANVCCVQFPPDSARLLAIGSADHNIYCYDLRSIRIPLYTLFGHSKTV
SYVKFVDSTTLVSASTDNTLKLWDLSTITSRVLESPLQTFTGHTNVKNFVGLSISDGYIA
TGSETNEVFIYHKAFPMPVLSYKFGSKDPFSGHEVDDANQFISSVCWRGQTSTLVAANST
GNIKLLEMV
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgatggagggttcatcggagtctccttggcagaagtctgagagttctagggaattgaat
gcttgtgtggtatccagcgagagccttgggttggttcacgccaaccctgttggcgtctca
ggtgatgcctcgaataatgccagttctgtgaggtgcacgccgtgggataaagggatagat
cggggttttcttccccactctgatcacctcgacaaccaggtcggctcttctggggtctgt
ggggatgcggagggtgtgggagatgttgctcatgcagtagaacgggatgatattagcttg
aggcagtggttggataaaccggaccgatctgttgacctctcggagtgcttgcacatgctc
aggcagattgtggaaactgtgaacctggcacatgcacaaggcgttgttgttcataatgtg
cggccatcttgcttcgtcatgtcctcgtttaacagcgtttccttcattgagtctgcttca
tgttcgagctcaggttctgattcttatggtgatgccgtaaacaatcaaacagtaggggga
cagagctgctcctcaccatcagcccaggacttgccttgtgggagaagtggggttggtgtt
gaagattccctgcttgagatctctcgtgctggtgcttcctatagagcatcggagactagt
tgtttgcagtctggttctgcaaatcttacacgtctatcatcaattgaagagagagaggaa
aataaaatagagggtagcaggaaagtcgaagatgctgaagaaaataagaaaacattccca
ctaaagcagatattactcatggaggccaactggtacactagtccagaagaggtcgctgga
gcttcaagttctttttcttcagacatttatcgattgggggttctcctttttgagttgttc
tgtccgtttagctccatggaagaaaagctcagaacaatgtccaatctcagacatcgtgtc
ctgcctcctcagttgctgttgaagtggccaaaagaagcttcattttgtctttggttactg
catcctcagccaagtactagaccaaaaatgagtgatgtgttacaaagtgacttcctcaat
gagccaaggaataatttggaagaacgtcaggcagctataagtctcagagaggaaatagaa
gaggaggagctgctgttggaattcctgttgcagatgcaacaaaggaaacaagaagcttct
gataaattgcaccatactattgattgtctatcttctgacattgaagaagttctgaaacag
caaagcatcctaaagaaaaagggggacttctacctggaaccgaacctggatgataattca
gcattggaaaaggtggatcatcgatcattaaatcttgcaagagatgagggatctgctggc
ttggggtccaggaaacgtttcaggctaggacttcgggtttctgatgaagaggaacttaat
gagaaccaaggtgaggttcagaagccagaaaaccttgaaagtattctgtccaaaagttct
cgattgatgaagaactttaaaaaactggaggctgcttatttttcaacaagatgcaggctt
atgaaaccaactatgaaaccacctactagatgcttaccaatcagcagtagtggcaggggt
tcaattgtggtaactgaaggaagttctgttgataatgtggcctttaaggagggttttggt
gaaggtaacaaaagtggatggataaatccattccttgatggtttgtgcaagtatctatcg
ttcagcaaattaaaagtgagggcagaactgaagcaaggggatctgctaaattcttccaac
cttgtgtgctctttgagttttgatcgtgatggggaattttttgctacagctggtgtaaat
aggaaaataaaaatttttgaatgtgacatgattctaaatgaagaccgtgacattcactat
cccgttattgagatggctagcagatcaaaacttagcagtatatgttggaatagttatatc
aaaagccagattgcttcaagtgactttgaaggaatcgtgcaggtttgggatgctacaaga
gggcaagtatttatggaaatgagggagcatgagaaacgtgtatggtctgtagacttttct
ttagcagatccaacaaagttggctagtggaagtgatgatggtgccgttaaactatggaat
atcaatcagagaggtagtgtcagcactattaaagcaaaggccaatgtctgctgtgttcag
tttcctcctgattctgcacgtttgcttgccataggttcagcggatcataatatctattgc
tatgaccttcgtagcataagaatacctctctacacattatttggtcacagtaagactgtg
agctatgtgaaatttgtagattcgacaactcttgtttctgcatcaacggataacacactc
aagctttgggatttatcaacaatcacgtctcgggtgctcgaaagtcctctccaaaccttc
actgggcacacgaatgtaaagaattttgtgggcctttctatatctgatggatacattgct
acaggctcagaaacaaatgaggttttcatctaccacaaagctttccccatgccagttttg
tcgtacaaatttggcagtaaggacccattttctggccacgaagttgatgatgccaatcaa
ttcatatcctccgtgtgttggcgtggtcagacctccacacttgttgcagctaattctact
gggaatatcaaactattagagatggtctga
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