Macadamia integrifolia (macadamia nut): 122093410
Help
Entry
122093410 CDS
T07436
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122093410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ming04121
]
122093410
Ubiquitin system [BR:
ming04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122093410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
122093410
NCBI-ProteinID:
XP_042519683
LinkDB
All DBs
Position
11:complement(26071831..26078439)
Genome browser
AA seq
581 aa
AA seq
DB search
MASKRKRDSPEEKEKRVSPFPDEVLERVLGFVKSHKDRSSVSLVCKDWYSAERWSRTHVF
IGNCYSVSPEILVGRFPNIRSVTLKGKPRFSDFNLVPSNWGADIQSWLDVFVSAYPHLEE
LRLKRMTVTDESLDFLAHSFPNFKALSLVSCDGFSTDGLATIAAYCKNLTELDILENGIE
DLGGGWLSCFPENFTSLEILNFANLNSEVSFDSLERLVARCKSLKVLKANKNVTLEQLQR
LLSRAPQLMELGTGSFSQDFSFLQYEELKKAFNNCRNLHTLSGLWEATSLYLPALYPACA
NLTFLNLSYAALQSAELAKLLPNCPLLQRLWVLDTVEDKGLEAVGSSCPLLEELRVFPAE
PVVGGGGGVTESGLVAVSRGCHKLHYTLYFCRQMTNAAVATVVQNCPDFTHFRLCIMNPC
QPDYLTNESMDEAFGSVVKTCTKLQRLAVSGLLTDLTFEYIGRYAKNLETLSVAFAGSSD
RGMQCVLEGCPKLRKLEIRDSPFGNAALLSGLERYESMRSLWMSACNVTMNGCRLLAREM
PRLNVEVIKEDESDDTQAEKVYVYRSVAGPRRDAPPFVLTL
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaaaaggaaaagagattcgccggaggagaaggagaaacgtgtttctccgttc
cctgacgaagtattggaacgtgttctgggtttcgtgaagtcccacaaggataggagctct
gtttctctagtttgcaaggactggtacagtgcagagagatggagccgaactcatgtgttc
attggcaactgctactctgtttcacctgagattcttgttgggagatttcctaacattcga
agcgtaaccttgaaagggaaacctcggttctcagatttcaacctcgtcccttctaactgg
ggagccgatatacaatcatggcttgatgtatttgtctctgcgtatcctcaccttgaggag
ctgcgtcttaagaggatgactgtcacggatgaaagcttggattttcttgcgcattcattt
cccaacttcaaagctctctcccttgtgagttgtgatgggttcagcactgatggccttgcc
accattgccgcatattgcaagaacttgactgagctggacatactggagaatggcattgag
gatcttgggggtggctggttgagttgctttcctgaaaacttcacatcactagaaatactg
aactttgcaaatttgaacagtgaagtcagttttgattccctggagaggcttgttgctaga
tgcaagtcattgaaggttttgaaagcaaataaaaatgtgactttggaacaattacaaagg
ctgctgtcgcgagctcctcaattaatggaactgggaactggctcattctcgcaagatttc
agttttctgcagtatgaagaactcaaaaaagcattcaacaattgcaggaacttgcacaca
ctgtctggtttatgggaagccacttccctttatcttccagccctctatcctgcatgcgct
aatctgacattcttgaatttgagctatgctgccttacagagtgctgaacttgctaagctc
ctccccaattgcccacttctccagcgtctctgggtcctggacactgtagaagacaaagga
cttgaggctgttgggtcgagctgccctttactcgaggagcttcgtgtctttcctgcagaa
cctgtggtggggggtggtggaggggtgacagagtctggcttggtagctgtctcccgtggc
tgccataaactgcactatactctctacttctgccgacagatgaccaatgctgctgtggct
acagtagtgcaaaactgccctgatttcacccacttccgtctctgcatcatgaacccttgc
cagccagattacttgactaatgagtctatggatgaagcttttggttccgtggtgaagaca
tgcaccaaacttcagaggcttgcggtctctggtctattgactgacctgacttttgagtac
attgggagatatgctaagaacttggagacattatctgtggcatttgcaggcagcagtgac
agggggatgcagtgtgtgcttgaaggatgtccaaagctacggaaacttgagatacgagat
tccccctttgggaatgcggctctgttgtcagggctggagaggtacgaatcaatgaggtct
ttgtggatgtcagcctgcaatgtgacaatgaatgggtgtaggctgctggctagggagatg
ccaaggttgaatgtggaggtgatcaaagaggatgaaagtgatgacactcaggctgagaag
gtctatgtttatcgctctgttgcagggccaagaagggatgcccctccttttgttctcacc
ctctga
DBGET
integrated database retrieval system
