KEGG   Macadamia integrifolia (macadamia nut): 122093687
Entry
122093687         CDS       T07436                                 
Name
(RefSeq) THO complex subunit 3 isoform X1
  KO
K12880  THO complex subunit 3
Organism
ming  Macadamia integrifolia (macadamia nut)
Pathway
ming03013  Nucleocytoplasmic transport
ming03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ming00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122093687
  09122 Translation
   03013 Nucleocytoplasmic transport
    122093687
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ming03019]
    122093687
   03041 Spliceosome [BR:ming03041]
    122093687
Messenger RNA biogenesis [BR:ming03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     122093687
Spliceosome [BR:ming03041]
 Complex C
  Other components
   EJC/TREX
    122093687
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    122093687
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_Prp19 WD40_CDC20-Fz WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_EML_2 ANAPC4_WD40 EIF3I Beta-prop_CAF1B_HIR1 WDR55 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_NOL10_N Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR75_1st DSE1_N WD40_MABP1-WDR62_2nd eIF2A Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_EIPR1 WDR90_beta-prop_4th WD40_RFWD3 Tricorn_2nd Beta-prop_DCAF12 WD40_MABP1-WDR62_1st Beta-prop_EML NBCH_WD40 TRM82_WD Beta-prop_WDR41 Beta-prop_IFT80_2nd PAC11 Beta-prop_WDR11_1st CNH PROPPIN Beta-prop_Nup120_160 WD_LRWD1 PD40
Other DBs
NCBI-GeneID: 122093687
NCBI-ProteinID: XP_042520016
LinkDB
Position
11:complement(33556286..33572986)
AA seq 354 aa
MVRICFYSHLALLLLVNEVQSLLLVLKTPSCKPQRIAEMEETPIPFKNLHSREYQGHKKK
VHSVAWNCTGTKLASGSVDQTARVWQIEPHGHAKVKDVELKGHTDSVDQLCWDPKHADLI
ATASGDKTVRLWDARSGKCSQLVELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKP
IHKRKFSYEVNEIAWNTTGEIFFLTTGNGTVEVLAYPSLKILHTLMAHTAGCYCIAIDPI
GSHRYFAVGSADSLVSLWDLSEMLCVRTFTKLEWPVRTISFNYTGDYIASASEDLFIDIS
NVHTGRTVHQISCRAAMNSVEWNPKFNLLAYAGDDKNKYQADEGVFRIFGFESA
NT seq 1065 nt   +upstreamnt  +downstreamnt
atggtccgtatatgtttttattctcacttagcgctcttgctgttagtaaatgaagtgcag
tctctcctgctagttttgaaaacccctagttgcaaaccccaacgcatagcggagatggaa
gaaacaccaataccatttaaaaatcttcacagcagagaatatcaaggtcataagaagaag
gtgcattcggtggcatggaattgcactggcacgaagctagcttccggttcagttgatcaa
acagctcgagtttggcaaatagagccgcatggccatgctaaggttaaagacgtagagttg
aaagggcatactgatagtgtggaccagctatgctgggaccccaaacatgccgatttaatt
gcaactgcctcgggtgacaaaactgttcgcctttgggatgctcggagtggaaaatgctct
cagctggtggagcttagtggtgaaaacatcaacattacatacaaacctgatgggacacac
atagctgttggtaacagggatgatgaactaacaatattggatgttcgcaaatttaagcca
attcacaaacgaaagtttagttatgaggtaaatgagattgcatggaacacaacgggagag
attttctttcttacgacaggaaatggcaccgttgaggtattggcttacccatctctaaaa
attcttcacactcttatggctcacacagcagggtgctattgcatagcgatcgatccaatc
ggaagtcacagatattttgctgttggaagtgctgattctttggtcagcctttgggatctc
tcggagatgctttgtgtgagaacattcacaaaacttgaatggcctgtcagaaccataagc
ttcaattatactggagactacatagcttctgccagtgaagacttattcattgatatttca
aatgtacatactggaagaactgtccatcagatttcttgtcgggctgcaatgaacagtgtt
gaatggaatcccaaattcaatttactggcatatgcaggagatgacaagaacaagtatcag
gccgatgaaggtgtctttcgaatttttggctttgagagtgcttaa

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