KEGG   Macadamia integrifolia (macadamia nut): 122093698
Entry
122093698         CDS       T07436                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 4-like isoform X1
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
ming  Macadamia integrifolia (macadamia nut)
Pathway
ming03020  RNA polymerase
ming03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ming00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    122093698
  09124 Replication and repair
   03420 Nucleotide excision repair
    122093698
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ming03021]
    122093698
   03400 DNA repair and recombination proteins [BR:ming03400]
    122093698
Transcription machinery [BR:ming03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     122093698
DNA repair and recombination proteins [BR:ming03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      122093698
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 122093698
NCBI-ProteinID: XP_042520039
LinkDB
Position
11:complement(27513569..27522112)
AA seq 239 aa
MAEKGGKGFSVPKERKISSKSPSKKGASLKGKDSSSKRGRKKVHFETSDSEDSPTAGIRS
SSKSGGKISFESPVAKGDSSKGGKSDKTGKTGGKGTVPKEPTVLELKTEEELPKDAKCLM
DCEAVARLQGIQDQQAVLSQDPAFKMPVSFDKGLLYAKASNHYMSHQSVRQVLQKLKRHG
ISDGEVWSTTQMICMIANICPESVDEVFALVPSLKANRRKIEEPLKDVFYELAKCKKLD
NT seq 720 nt   +upstreamnt  +downstreamnt
atggcggaaaaaggtggaaaaggattttcagtaccgaaagaacggaagatttcatcgaaa
tcccccagtaagaagggagcttcactgaaagggaaggatagctcatcaaagaggggaagg
aagaaggttcactttgagacttcggattctgaagattcaccaacagcagggatcagaagt
tcatcaaaatcaggtggcaaaatctcgtttgagagccctgttgctaaaggagatagcagc
aaaggggggaaaagtgataaaacaggaaagactggtggcaagggcactgtgccaaaggaa
ccaactgttctagagttgaaaactgaagaagagcttccaaaggatgcaaaatgcctgatg
gattgtgaggcagtagcccgtttacaaggaatccaggatcagcaagccgttctgtctcag
gacccagcttttaaaatgccagtatcatttgacaaaggcctgctgtatgccaaagctagt
aaccattatatgagtcatcagtctgtgagacaagtcctacagaaactcaaaagacacggc
atctctgatggcgaggtttggagcacaacacaaatgatatgcatgattgctaacatttgc
cctgaatcggttgatgaagtgtttgctcttgttccatctttgaaggccaacaggcgcaag
attgaggaacccctcaaagatgtattttatgaattagccaagtgtaaaaaactcgattga

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