KEGG   Macadamia integrifolia (macadamia nut): 122093820
Entry
122093820         CDS       T07436                                 
Name
(RefSeq) splicing factor U2af large subunit B-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
ming  Macadamia integrifolia (macadamia nut)
Pathway
ming03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ming00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122093820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ming03041]
    122093820
Spliceosome [BR:ming03041]
 Complex A
  U2 snRNP components
   U2 related factors
    122093820
 Complex B
    122093820
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 122093820
NCBI-ProteinID: XP_042520253
LinkDB
Position
11:25171707..25192763
AA seq 557 aa
MSGYGSRYDGNGEGGYSSSASYAQNKGVDNGGSSPYDVFEDRDSQPKYASRGSDHERSRT
RESNRDREKDRDRHHRDYKDRSIREERGRDKYDDHDRRRSNDYDRHHDYDRDRDRRHRHR
SRSRSRDKSRNRSRSRSRSRSRSKSKRTSGFDMAPPGTAVLPIAAATGQLPGVPQTSPGT
FPNMYPMGTAQFGAIPVPIQAMTQQATRHARRVYVGGLPPMANEQTIATYFSQVMSAIGG
NTAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGVSVRVRRPTDYNPSLA
AALGPSHPSPNLNLAAVGLTPGAIGGAEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGF
DLVKDRDTGNSKGYGFCVYQDPASTDVACAALNGLKMGDKTLTVRRATASSMQAKPDQEI
ILAAQQQLAMHKFALQVGGVNVPEVAMGPRGPEETQTKVVCLTEVVLADELRDDEEYEEI
LEDMREEGGKFGSLVNVVIPRPNPSGVPTPGIGKVFLEYSDTAGSAKAKAALNGRKFGGR
TVVAIYYPEDNYFNGDL
NT seq 1674 nt   +upstreamnt  +downstreamnt
atgtctggttacggtagtcggtatgatggcaatggcgaaggaggttacagttcttcggca
tcttatgcgcagaacaaaggagtcgataatggtggatcttctccttacgatgtattcgaa
gatagagactcccaacccaagtatgcttcccgtggatcagatcatgaaagatcaaggact
agggaaagcaatcgggatagggaaaaggatcgtgatcgtcatcatagggactacaaggat
agaagtataagagaagaaagagggagagataaatatgatgatcatgaccgtcgtcgaagc
aatgactacgacaggcatcatgattatgatcgagatagagataggagacatagacataga
tcaagatcccgttcaagggataaatctaggaaccgatctagatcacgctcccgctctcgg
tctcgttcaaaaagcaaaaggacaagtggttttgacatggcaccacctggtactgcggtg
ctgcctattgctgctgctacagggcaattgccaggtgttcctcagacatcgcctggaaca
ttcccaaacatgtaccccatgggaactgcacagtttggggccattcccgtgcctattcaa
gctatgacacagcaggccacaaggcatgcacgtcgagtatatgttggtggccttcctccc
atggcaaatgagcagacaattgcaacatattttagccaggttatgtctgctattggagga
aatactgcaggtccaggtgatgctgtggtcaatgtgtacattaatcatgaaaagaagttt
gcttttgtggagatgagaactgttgaagaagcaagtaatgcaatggcattagatgggatc
atattcgagggggtttctgtaagggttcgaaggcctactgactacaacccttcattggct
gctgctcttggacctagccatccaagccctaatctaaacctagctgctgttggtcttaca
cctggagcaattggtggagcagagggaccagatcgtatatttgttggtgggttaccatac
tattttacggaagcacaaataagagaactgctagagtcattcgggccactgcgtggattt
gaccttgttaaggatagagatactgggaactcaaaaggttatggtttttgtgtatatcag
gatccggcgtcaacagatgttgcttgtgctgcacttaatggtctgaaaatgggtgataag
actcttactgtccgccgtgccactgccagcagcatgcaggcaaaaccagatcaggaaatt
atattagcagcacagcagcagctcgcaatgcataaatttgccctgcaggttggtggtgta
aatgtacctgaagttgcaatgggacccagaggtcctgaggagactcagactaaagtagtt
tgcttgaccgaggttgtattggctgatgagctgagggatgatgaagagtatgaagaaata
ttggaagacatgagggaagaaggcggcaagtttgggtccttggtgaatgttgtgatccct
cgaccaaatccaagtggagtaccaacccctggaattggaaaggtgttcttggagtattca
gacacagctggttccgccaaggccaaggctgctctcaatgggaggaaatttggaggtaga
accgttgttgccatatattatcctgaagacaattattttaacggagacttgtga

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