Macadamia integrifolia (macadamia nut): 122093826
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Entry
122093826 CDS
T07436
Name
(RefSeq) CCR4-NOT transcription complex subunit 9-like isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122093826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ming03019
]
122093826
Messenger RNA biogenesis [BR:
ming03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
122093826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
122093826
NCBI-ProteinID:
XP_042520268
LinkDB
All DBs
Position
11:complement(31617635..31639845)
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AA seq
388 aa
AA seq
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MSILPQSSLNPPSEGPSPTSASSGTNAERSTDAGVDASSDAGVDASSDAGVDASSDACID
ASIEASIDAGIDASIYASIYPRVDANTAQASKYPKLVSAEQLVHDLFEKDLREDALQELC
RVALLKREIFQDLAPLLWHSFGTIAALLQEIVSIYPYLSPPTLTPGASNRVCNALALLQC
VASHQDTRTLFLNAHIPLYLYPFLNTTSKTRPFEYLRLTSLGVIGALVKVDDTEVISFLL
STEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLHYICATAERFFAVGRVLGTMVQS
LAEQPSPRLLKHIIRCYLRLSDNLRACEALRNCLPEILKDSTFTGCLRDDPVTKRWLQQL
VHNVAAVGGMPAHQPAGGIEHMHGSGGH
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtctatccttcctcagtcatctttgaatcctccctccgaaggccccagtcccacttct
gccagttccggtaccaacgccgagcgcagcactgatgccggcgtcgacgccagcagtgat
gccggcgtcgacgccagcagtgatgccggcgtcgacgccagcagtgacgcctgcattgac
gccagcattgaagccagcatagatgccggcatcgatgccagcatctacgctagcatctac
ccccgtgttgacgcgaacactgctcaggccagcaagtaccctaaattggtgtctgccgag
cagttggtgcatgatctttttgagaaggatctgagagaagatgctcttcaagaactctgc
agggtagcccttctgaagagagaaatattccaagatttggccccattgttgtggcattct
tttggtactattgctgcactcttacaggagatagtatcaatatatccttatctttcacca
ccaaccctaacaccgggagcatctaaccgagtttgcaatgcactcgctcttcttcagtgt
gtagcttctcatcaagatacaaggacattgttcctaaatgcccatatacctttgtatctt
taccctttcctcaatacaacaagtaagacaagaccattcgaatatctgaggcttaccagc
ttgggtgttattggtgcccttgtaaaggttgatgatacagaagttattagcttccttctc
tcgacagagataatccctttgtgcctgcgcacaatggagatgggtagtgagctttcaaaa
acagtggctacatttatagttcaaaaaattctgttggatgatgtggggctgcattatatt
tgtgcaacagcagagcggttcttcgccgtgggtcgtgttttgggaaccatggttcagtct
cttgccgagcagccctctccccgtctgctgaagcatatcattcgttgttatcttagactg
tcagataatctaagggcttgtgaagcattaagaaattgccttccagaaattttaaaggat
tcaaccttcactggttgtcttcgtgatgatccagtaaccaagcgttggttgcaacagttg
gttcataatgtggcagctgtaggtggcatgcctgcacatcaacctgcaggaggaattgaa
catatgcatggtagcggtggccactaa
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