Macadamia integrifolia (macadamia nut): 122093888
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Entry
122093888 CDS
T07436
Name
(RefSeq) eukaryotic initiation factor 4A-III homolog A-like
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03013
Nucleocytoplasmic transport
ming03015
mRNA surveillance pathway
ming03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122093888
09122 Translation
03013 Nucleocytoplasmic transport
122093888
03015 mRNA surveillance pathway
122093888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ming03019
]
122093888
03041 Spliceosome [BR:
ming03041
]
122093888
03009 Ribosome biogenesis [BR:
ming03009
]
122093888
03012 Translation factors [BR:
ming03012
]
122093888
Enzymes [BR:
ming01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122093888
Messenger RNA biogenesis [BR:
ming03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122093888
mRNA cycle factors
Stress granule specific factors
122093888
Spliceosome [BR:
ming03041
]
Complex C
Other components
EJC/TREX
122093888
Ribosome biogenesis [BR:
ming03009
]
Eukaryotic type
90S particles
Helicases
122093888
Translation factors [BR:
ming03012
]
Eukaryotic type
Initiation factors
eIF-4
122093888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
122093888
NCBI-ProteinID:
XP_042520367
LinkDB
All DBs
Position
11:complement(1811908..1816234)
Genome browser
AA seq
293 aa
AA seq
DB search
MAAATASAAPSNRPPRRNGPGPIAEDDSLVFETSHGVEAITSFDQMGIKDDLLRGIYQYG
FEKPSAIQQRAVLPIINGRDVIAQAQSGTGKTSMIALTVCQMVDTSTREYVCSPSSFVLL
FLSLRFFVGSFLVVIAQFVFGYVVEIEILPNVKVEREMDSPTFLLSSFVDFKGGKKGINP
DTFLVVLRLYFLILLPMVTFFSFFFSSSSFFFFFHFSMLNVCFLPNQVSLVINYDLPNNR
ELYIHRIGRSGRFGRKGVAINFVRNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgcaacagcctcagctgctccatcgaacagacctcctcggcgcaacggacct
ggacccattgctgaagacgatagcctagtgttcgaaactagtcatggcgttgaggctatc
acatcgttcgatcagatgggtatcaaagatgatcttctccgagggatttatcaatatggg
ttcgagaagccgtctgcgatacagcagagagcggttttgcctatcatcaatggtcgtgac
gtgattgctcaggcacaatctggtactggcaaaacctcaatgattgccctcactgtctgc
cagatggtcgatacctcaaccagagagtacgtttgttccccttcgtcttttgtgcttctc
tttctctctcttcgtttttttgtcggctcttttctcgttgttattgcacagtttgttttc
gggtatgtggtagagatagagattttgccgaatgtgaaggttgagagagagatggattcc
cccacctttctactctcttcattcgtggatttcaaagggggaaaaaagggcataaaccct
gatacatttcttgttgtactccgtttatattttttgattttactccccatggtgaccttt
ttttcttttttcttttcttcttcttcttttttttttttttttcacttcagtatgttaaat
gtttgctttctgcctaatcaggtgtctttggtgatcaattatgacttacccaacaaccgt
gagctttacattcacaggataggtcgatctggccgttttggacggaagggtgttgccata
aactttgtccgcaacgatgacataaggattctcagggacatagaacagtattacagcaca
cagattgatgagatgccaatgaatgtcgctgatctgatttaa
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