Macadamia integrifolia (macadamia nut): 122093962
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Entry
122093962 CDS
T07436
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming00040
Pentose and glucuronate interconversions
ming01100
Metabolic pathways
Module
ming_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122093962
Enzymes [BR:
ming01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
122093962
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
122093962
NCBI-ProteinID:
XP_042520458
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Position
11:complement(5824288..5833500)
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AA seq
467 aa
AA seq
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MIASNAAATVDVAAVMLVEEENELEAKMKKMREMQVGKSRCLVFCVGEAIYVVRTMGVSV
LSFLFCLALLFAWARSRSVPLDESSGTIFDVMNFGAVGDGNTDDSRAFLKAWNEVCKCTA
PSTLTILDKTFLLKPLKFQGPCKTDKITVMISGKLTAPSDISEWKDSDTDNWIRFSSING
LTITGSGPAQLDGRGSSCYLTQKFFCFLVQKCSSLPNTLFLDNIIGLSVTGLKFIDSPSM
HFVIQDSSWVYVSQLYIVAPGDSPNTDGIHITSSEHVQITDSVIGTGDDCISIETGTRDL
NVSRIKCGPGHGISIGSLGDPGEYSKALVEEIHVSNCEFIGTMNGARIKTWQGGSGFARE
ITFENCTMSSVDNPIVIDQYYCNGKTDCKNQTSAVEVSKVLFRGIKGNSTREVAIELACS
ETVPCTDIYLKDIDLRRTDRRYKTTSYCDCVHGNAISVVPFVQCLAK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgatagcatcgaacgccgctgctacggtcgacgtagctgctgtgatgctggtggaagaa
gagaacgagctagaggcgaagatgaagaagatgagggaaatgcaagttggtaagagcaga
tgtttggtgttctgtgtaggggaagccatctatgttgttcgaaccatgggcgtttctgtt
ctctcttttttgttttgtttggctttactatttgcatgggctcgctcaagaagtgtccca
ttagatgaatcttcagggactatttttgatgtcatgaattttggagcagttggagatggc
aacaccgatgactcaagggcattcttgaaagcatggaatgaggtttgcaaatgtactgca
ccttccaccttgacaattctagacaagaccttcctgttgaagccattaaaatttcaaggt
ccatgcaaaacagataaaattactgtcatgatttcaggaaagctaacagctccaagtgat
atatcagaatggaaagattctgatacagataactggattaggtttagttccattaatgga
ctaacaatcactggatcaggacctgcccagttagatggacggggttcttcctgttatttg
actcaaaagttcttttgtttccttgtgcagaagtgctccagtctgcccaatacattgttt
ttagacaatataattggtctaagtgtgactggtttgaaattcattgacagtccaagcatg
cattttgtgattcaagactctagttgggtttatgtttcacaattgtatattgtagcacct
ggggatagtccaaacacagatggtatacatataactagtagtgaacatgttcagatcaca
gactcagtcataggaactggagatgactgtatttcaatcgaaaccggaaccagggaccta
aatgttagtcgaattaaatgcggcccgggacatggaataagtattggaagcttaggggat
ccaggtgagtactcaaaagctttagttgaagagattcatgtctccaattgtgagtttatt
gggacaatgaatggggcaaggataaagacatggcagggtggatcaggttttgctagagag
atcacatttgagaactgtactatgtcttcggttgataatcctattgtcattgatcagtac
tactgtaatggtaaaactgattgcaagaaccaaacatcggctgttgaagtaagcaaagtt
ttgttcagagggataaaagggaattccacaagagaagtcgccattgagcttgcatgtagt
gagactgttccttgcacagacatctatttgaaggatattgatttgagaagaactgaccgc
agatacaagacaacttcttattgtgattgtgtacatggaaacgcaatttctgttgtacca
tttgtacaatgcctagcaaagtga
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