KEGG   Macadamia integrifolia (macadamia nut): 122094025
Entry
122094025         CDS       T07436                                 
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1
  KO
K14962  COMPASS component SWD2
Organism
ming  Macadamia integrifolia (macadamia nut)
Pathway
ming03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ming00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    122094025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ming03019]
    122094025
   03036 Chromosome and associated proteins [BR:ming03036]
    122094025
Messenger RNA biogenesis [BR:ming03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     122094025
Chromosome and associated proteins [BR:ming03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     122094025
    COMPASS/SET1 complex (yeast)
     122094025
SSDB
Motif
Pfam: WD40_Prp19 WD40_WDHD1_1st WD40 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_TEP1_2nd NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_WDR75_1st Beta-prop_IFT122_1st KNTC1_N Beta-prop_SCAP PQQ_2 Beta-prop_NUP159_NUP214 Beta-prop_Nup120_160 Beta-prop_DCAF4 Cytochrom_D1 VPS11_N Beta-prop_WDR35_TULP_N Beta-prop_IFT140_2nd
Other DBs
NCBI-GeneID: 122094025
NCBI-ProteinID: XP_042520554
LinkDB
Position
11:25006372..25023115
AA seq 333 aa
MPGGSQSEREDKVSMELTEEIIQSMEVGMAFRDYNGRISSMDFHKASNYLVTASDDESIR
LYDVSTATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKG
HHDRVVSLSLCSRKEFFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAIAYDEQGLVFAIA
FGGHVRMFDARKYEKGPFDIFSIGGDLSDANVVKFSNDGRLMLVTTMDGHIHVLDSFRGT
LLFTYNVKPVSSDSTLEASFSPEGMFVISGSGDGSVYAWSVRTGKEVASWMSSEVEPPVI
KWTPGSLMFVTGSSELSFWIPDLSKLGSYVGSK
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgccaggagggagtcaatccgaaagagaagataaggtatcgatggagctaaccgaggag
atcattcaaagcatggaagttggtatggcctttcgagactacaatggtagaatcagttca
atggattttcacaaggcatcaaattatcttgtgacagccagtgacgatgaatcaattcgt
ctttatgatgtatccactgcaacttgtttgaagaccattaacagcaaaaaatatggggtt
gatctggtttgcttcacttctcatccaacaacagtcatatactcctcaaaaaatggctgg
gatgaatctctgcggcttctgtccttacatgataataagtacttgcggtactttaaaggt
caccatgacagggttgtgtcactcagcttgtgctctcgaaaggagttctttatctctggc
tctctggatcgaactgttctactttgggatcaacgagctgagaagtgtcagggccttcta
cgtgtacaaggaagacctgcaattgcttatgatgaacaaggactggtttttgcaattgcc
tttggaggacatgtaagaatgtttgatgctcggaaatacgagaagggtccttttgacatc
ttttctattgggggagatctatctgatgccaatgtagtaaaattcagtaatgacgggagg
cttatgcttgtgaccactatggatgggcatattcatgtacttgattcattccgtggcaca
cttttattcacatacaatgtcaagcctgtctccagcgattccacattggaggcatctttc
agccctgagggaatgtttgtaatatcaggttcaggtgatggtagtgtatatgcctggagt
gtcagaactgggaaggaagttgccagttggatgagttctgaggttgaacctccagtcata
aagtggactccaggaagcctgatgtttgttactggatcttctgaactctcattttggatt
ccagacttgtccaaattgggctcttatgttggatcaaaatag

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