Macadamia integrifolia (macadamia nut): 122094303
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Entry
122094303 CDS
T07436
Name
(RefSeq) transcription initiation factor TFIID subunit 6 isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122094303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ming03021
]
122094303
03036 Chromosome and associated proteins [BR:
ming03036
]
122094303
Transcription machinery [BR:
ming03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122094303
Coactivators
SAGA/TFTC/STAGA complex
122094303
Chromosome and associated proteins [BR:
ming03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
122094303
STAGA complex
122094303
TFTC complex
122094303
SAGA complex
122094303
SLIK complex
122094303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CBFD_NFYB_HMF
TAF4
Motif
Other DBs
NCBI-GeneID:
122094303
NCBI-ProteinID:
XP_042520999
LinkDB
All DBs
Position
11:9308833..9321220
Genome browser
AA seq
543 aa
AA seq
DB search
MSIVPKETIEVIAQSIGINNLSPDVTLALAPDVEYRLREIMQEAIKCMRHSKRTILTADD
VDSALSLRNVEPIYGFASGDPLRFKRAVGHKDLFYIDDKDVEFKDVIEAPLPKAPLDTAV
VAHWLAIEGVQPAIPENAPVEALVAPPENKKSEHKEDAFPTDIKLPVKHVLSRELQLYFD
KITELTVSRSDSVLFKEALVSLATDSGLHPLVPYFTYFIADEVTRSLNDFQLLFALMRVV
RSLLQNPHIHIEPYLHQMMPSVITCLVAKRLGNRFTDNHWELRDFTAKLVASICKRFGHV
YHNLQPRVTRTLLHAFLDPTKSLTQHYGAIQGLAALGPSVVRLLVLPNLEPYLQLLEPEM
LLEKQKNEMKRHEAWRVYGALLCAAGQCMYDRLKLCPGLLTPRTNAVFRTNSRVATKMPN
KRKASMDHLQQPPLKKVTTDGPMGMMPTISMPTGKQGGVDGFPHASGESGVGPSSSGQVL
NENISGSSGRRDKDDGQAQKTSAVLSQAWKEDMDAGNLLVSLYELFGESMLSFTPMPELS
FFL
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgagtattgtgcctaaagagaccatagaggtcatcgcacagagcattgggattaacaat
ttgtctccagatgtcacactcgcccttgcccctgatgtcgagtatcgtttgcgggagatc
atgcaggaggctatcaagtgtatgcgccactcaaagcggacaattttgacagccgatgat
gtggatagtgcactaagcttaagaaatgttgagccaatttatggttttgcttctggagat
cccttgcggtttaaaagagctgttgggcataaggatttgttctatattgatgacaaggat
gtggagtttaaagatgtaattgaagcacctctaccaaaagcaccactcgacactgcagtt
gttgctcactggcttgctattgaaggagtacaaccagctattccagaaaatgctccagtg
gaagcacttgtagctcctcctgaaaacaaaaagtcagaacacaaagaggatgcatttccg
actgacattaagttacctgttaagcatgtattatctagggaacttcagctatactttgac
aagatcactgagcttactgtgagtaggtcagattcggttctctttaaagaagctttagtg
agcttggctactgattctggacttcatcctttagttccttatttcacgtactttattgct
gatgaggttactcgaagtttgaatgatttccaacttctatttgctttgatgcgtgttgtt
cgaagccttcttcagaatccacacatacacatagaaccttatctacaccaaatgatgcca
tctgttattacctgccttgtggcgaaaaggttggggaacaggtttactgacaaccactgg
gagcttagagacttcaccgcaaaactggttgcttctatatgcaagagatttgggcatgtt
tatcacaatcttcagccacgtgtaacgaggactctgctccatgcatttctggacccaact
aaatcgttgactcaacattatggtgctattcaagggcttgcagcactgggaccgagtgtg
gttcgccttctggtattgccaaatcttgagccttatctgcaattactagagccagaaatg
ctacttgagaagcaaaagaatgaaatgaagaggcatgaagcttggcgtgtttatggagcc
ctattgtgtgctgcaggtcagtgcatgtatgatcgtctcaagttatgcccaggtttgcta
acccctcgaacaaatgctgtcttcaggaccaattccagagttgcgactaaaatgccaaat
aaacgcaaggcgagcatggaccacttgcagcagccaccactgaagaaagtcacaactgat
ggcccaatgggcatgatgccaacaatctccatgcctactggcaagcaaggtggggtagat
ggatttccccatgcatcaggggagtctggtgtgggaccatcatcatctggacaagtcctc
aatgagaacatctcaggcagtagtggcaggagagataaggacgatggtcaagcacagaag
acgtctgctgtccttagtcaagcttggaaggaggatatggatgctggtaatctcctggtc
tcattgtatgagttgtttggtgaaagcatgctatccttcaccccaatgccggagttgtca
ttcttcttgtga
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