Macadamia integrifolia (macadamia nut): 122094371
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Entry
122094371 CDS
T07436
Name
(RefSeq) ATP-dependent RNA helicase DEAH13 isoform X1
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
ming
Macadamia integrifolia (macadamia nut)
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ming03009
]
122094371
Enzymes [BR:
ming01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122094371
Ribosome biogenesis [BR:
ming03009
]
Eukaryotic type
90S particles
Helicases
122094371
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DHX37_C
Helicase_C
WHD_HA2
HA2_C
DEAD
AAA_22
nSTAND3
ATPase
AAA_19
Motif
Other DBs
NCBI-GeneID:
122094371
NCBI-ProteinID:
XP_042521078
LinkDB
All DBs
Position
11:28927227..28937334
Genome browser
AA seq
1351 aa
AA seq
DB search
MRSSHNNLEPSLDVDQKLLEHEEWFQESWSSKGDDSNAVILLEKKKKKTNGTSQLNVKKK
STMSKSQKRKLKKLEEEKEKAALLSTSMRILNKYKIQEDAYSLLQSSGSIGQVETMKEKR
RRAVKFSKAGLEVAQDERPFKKRNDGKTSHQSKSDFGENHQNQELSKDDLQCPEMPDSED
LNNICSSLDACQDPTYGSPHTAIPAKGFTDEDGGRGIQDDGKSSLLPPCNCDEIKSTKLL
LVPGGEMNGPKSDSHASSGLVDSATQRPISTPTVVHVSRPNEVESKRKDLPIVMMEQEIM
EAINENSALIICGETGCGKTTQVPQFLYEAGFGLNKSDSRSGIIGVTQPRRVAVLATAKR
VAFELGLRLGKEVGFQVRHDKRIGDHCSIKFMTDGILLREVQSDFLLRKYSVIVLDEAHE
RSLNTDILIGMLSRIIQIRQRLYKEQQEKILSGAKISPENLVSQLKLVLMSATLRVEDFV
SERRLFTENPPVIEVPTRQFPVTIHFSKRTEIVDYIGQAYKKVLSIHKRLPPGGILVFVT
GQREVEYLCRKLRKTSRELTEKFSNQKESEASAVLDVDSIDRGIDMKDINEAFEVHGSSD
HQRTDRFSSFDEDYDVLDEDEFDSDDDSGTESELEVGSDVEGSLKYENTEKDGKHFDVLG
EPGSFASLRAAFKALASNNVLNPTSEGKLDSPITPGSEGCLNQSSSISKKKRDLADGPCA
SAMCVLPLYAMLPAAAQLRVFEKVPEGERLVVVATNVAETSLTIAGIKYVVDTGREKVKN
YNSSNGMETYEIQWISKASAAQRAGRAGRTGPGHCYRLYSSAVFTNIFSDFSSPEISKIP
VDGVVLLMKSMGIDKVANFPFPTPPEANALVEAERCLKVLEALDGQGRLTPLGRAMAKYP
MSPRHSRMLLTVIQIMKKVQSYPRANLVFAYTVAAAAALSLSNPFIMQFEGSHNNSADLG
RDEKTDTVDTPKILDKQDKLKQKKLKEMAKLARAKFCNPSSDALTIAYALQSFELAGNPT
EFCKDNALHLKTMEEMSKLRKQLLQLVFHQSSVDVHEDFLWTQGTVDDVEQAWRISSNRH
PLLLNEEELLGQAICAGWADRVAKRMRVVSVSSDGERKVNAGRYQACMVKETVFLHRWSS
VSRTTPEFLVYSELLNAKRPYMHGVTSVKPDWLVKYAGSHCSFSAPLSDPKPFYEPTSDQ
VFCWVSPTFGPHLWQLPLHSLPVSDDVHRVSVFAYALLEGQVLPCLRSAQKFMAAPAVTI
LKSEAAGQRRVGNLINELMTGSRSIDSCAMLRKIWNENPEKLHSEIRDWFQEKFHDQFEE
LWVQMHREVLLEPRELFPKGVKKEKRKKNRD
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atgcggtcgtctcataacaacttggaaccatctttggatgtggaccagaaattgttagaa
catgaagaatggtttcaagaatcttggagttccaaaggtgatgatagcaatgcagtcatc
ttgctggaaaagaaaaagaagaaaacaaatgggacaagtcagctaaatgtgaagaaaaaa
tcaacaatgagcaaatcacagaaaagaaagctgaagaaattggaggaggagaaagagaaa
gcagccttgttgtctaccagcatgaggattttgaataagtacaagatccaagaggatgca
tattcacttctgcagtcttcagggagtattggtcaggttgaaactatgaaggagaaacgt
agaagggctgtaaagttttctaaggcggggttagaagttgcccaggatgagcgacccttc
aagaaaaggaatgatggcaagacttcccatcaaagcaaatctgattttggtgaaaaccat
caaaatcaggagcttagtaaggatgatttgcagtgcccagagatgccggacagtgaagat
cttaataatatttgtagttctttggatgcttgtcaagatccaacttatggcagcccacat
actgccatacctgctaagggattcactgatgaggatggtggcagaggcattcaggacgat
gggaagagttctttgctaccaccatgcaattgtgacgagataaaaagcaccaaactgctg
ctggtacctggtggagagatgaatggtccaaaatcagattcacatgcttctagtggtctt
gtagattctgctacccagagacctattagcaccccaactgttgtgcatgtatcaagacca
aatgaagttgaaagcaaaaggaaggatcttccaatagtgatgatggagcaggagataatg
gaggctataaatgaaaactctgcacttattatttgtggagaaaccgggtgtggtaaaact
actcaagttcctcagttcctttatgaagctggctttggtttgaacaagtctgactccaga
agtggaataatcggtgtcacgcaaccacgccgtgttgcagtccttgccacggccaagcga
gtggcatttgagcttggtctccgtttagggaaggaggttgggtttcaagttagacatgac
aagagaatcggggaccattgctccatcaagtttatgacagatggaattttgcttcgagaa
gtgcagagtgatttcttacttaggaagtattctgttattgttctggatgaggctcatgag
agaagcctgaatactgatatacttattggaatgctttcccgtattatacaaatccgccag
aggttatacaaagagcagcaagagaagattctttctggagcaaaaatcagtcctgagaat
ttagtatctcagttaaaacttgtgcttatgagtgcaaccttgcgagttgaggactttgtt
tcagaaaggaggttatttactgaaaatccacctgttatagaagttccaaccagacaattt
cctgttactattcacttttcaaaaagaaccgagatcgtggactacataggccaggcttat
aaaaaggtcttgtccattcacaagaggcttccacctggtggaatactcgtttttgtcact
gggcagagggaagtggaatatttgtgccgcaaactacgaaaaacttcaagggagctgact
gagaaattttccaaccagaaggagagtgaagcctccgctgtcttggatgtagattccatt
gatcggggaattgatatgaaagacatcaatgaagcatttgaggtgcatgggtcatcagac
caccagcgaactgacagatttagttcattcgatgaggattatgatgttcttgatgaggat
gagtttgactctgatgatgattcaggaacagagagtgagttggaagttggtagtgatgtt
gagggttcactgaaatatgaaaatactgagaaagatggtaagcattttgatgttcttgga
gaacctggaagctttgcctcactgagggctgcttttaaggctttggccagcaataatgtg
cttaatccaacttctgaggggaaactggattctcccatcacccctggctcagaaggatgt
ttgaaccaatcttcttccatttctaagaaaaaacgtgatttggcagatggtccttgtgcc
agtgcaatgtgtgttctgcctctttatgccatgctacctgcagcggcacagcttcgggta
tttgaaaaggttcctgaaggggagcggcttgtagtggtagctaccaatgtggctgaaacc
tccttaactattgcaggtataaagtatgtggttgacactggaagggagaaggtcaagaac
tacaattcctccaatggtatggaaacatatgagatacaatggataagcaaggcatctgct
gcccaacgtgcaggaagagccggcagaactgggcctggccactgttaccgtctctattct
tctgcagtttttactaacatattttctgacttttccagccctgaaatatccaaaatacct
gttgatggtgttgtccttctcatgaaatccatgggtattgataaggttgcaaatttccca
tttccaactcctcctgaggccaatgccttggtggaagctgagcgttgcttgaaggttctt
gaggcacttgatggtcaaggaagacttacaccccttggaagggccatggcaaagtatccc
atgagtcctcgccactctcggatgcttcttacagttattcaaattatgaagaaagtccag
agttatccaagggcaaatcttgtttttgcttacacagttgctgcagccgcagctttgagt
ttgtcgaatccttttattatgcagtttgagggaagccacaataattcagctgacttgggt
agagatgagaaaaccgataccgttgataccccaaagattctggacaaacaagataaactc
aagcagaagaaactaaaagaaatggctaaattggcccgtgcaaaattctgcaaccctagt
agtgatgctctgacaatagcttatgctttgcaatcatttgaacttgcagggaacccaaca
gagttctgtaaagataatgcattacacctgaaaaccatggaggagatgtccaagctaaga
aagcagctactccaattggtatttcatcaaagctctgttgatgtacacgaggatttcttg
tggactcaagggactgttgatgatgtagaacaggcttggaggatttcgtccaacaggcat
cccctattactaaatgaggaggagctcttaggacaagctatctgtgctggctgggcagat
agggttgccaagcgcatgagagtagtttcagtgtcatcagatggagaaagaaaagttaat
gcgggtcgatatcaagcctgtatggttaaagaaactgtgttcctccatcgttggtcttct
gtttctcgaacgactcctgagtttctggtctatagtgagcttctgaacgcaaaacgtcca
tatatgcatggagtgacaagtgtaaaaccagattggcttgttaaatatgctgggtctcat
tgtagtttctcagctccactttcagacccaaaaccattttatgaacccacaagtgaccaa
gtgttttgctgggtgagtccaacctttggtccccatttatggcagctaccattgcatagt
ttgccagtcagtgatgatgtgcatagagtgtccgtatttgcttatgctttacttgaaggc
caagtactgccttgcttaagatctgcacagaaattcatggcagcccctgcagttaccatt
ttgaagtctgaggcagcaggtcaaagacgggtggggaacctcataaacgaactaatgact
ggttcaaggtcaattgatagttgtgccatgttgagaaagatctggaatgagaatcccgaa
aaattgcattcggagattcgggactggtttcaggagaagtttcatgatcaatttgaggag
ctttgggtgcaaatgcatcgtgaggttcttttggagcctcgagaactttttcccaagggt
gtgaagaaagaaaagaggaaaaaaaatagagattaa
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