Mixta intestinalis: C7M51_00516
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Entry
C7M51_00516 CDS
T06391
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
mint
Mixta intestinalis
Pathway
mint03030
DNA replication
mint03430
Mismatch repair
mint03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mint00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C7M51_00516 (holA)
03430 Mismatch repair
C7M51_00516 (holA)
03440 Homologous recombination
C7M51_00516 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mint03032
]
C7M51_00516 (holA)
03400 DNA repair and recombination proteins [BR:
mint03400
]
C7M51_00516 (holA)
Enzymes [BR:
mint01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C7M51_00516 (holA)
DNA replication proteins [BR:
mint03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C7M51_00516 (holA)
DNA repair and recombination proteins [BR:
mint03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C7M51_00516 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Wheel
DUF5549
Motif
Other DBs
NCBI-ProteinID:
QHM70255
UniProt:
A0A6P1PX11
LinkDB
All DBs
Position
complement(560615..561646)
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AA seq
343 aa
AA seq
DB search
MIRIYPEQLHAQLHEGLRACYLLIGNEPLLLQESHDAIKACAQQQGFTEHFNVVLDNSTD
WDTVFSHCQSMSLFASRQTLTLTLPENGPNAAIATQLEKLSTLLHSDVLPILTGAKLTKA
QENSAWFKAFSAQAVLVPCATPEHAQLPRWVAARAKAMQLDLDDAACQLLCYCYEGNLLA
LSQALERLSLLWPDGKLTLPRVEQAVSDAAHFTPFHWVDALLAGKSKRALHILRQLAAEE
SEPVILIRTLQRELLLLLTLQRQQGNTPLRALFDQHRVWQNRRALFSEALQRLSLLQIRQ
AIQLLTRLEITLKQDYGQRLWPELETLSLLLCNKALPAELGEF
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatttaccctgagcaactgcacgcgcagctccatgaggggctgcgcgcctgc
tacctgcttatcggcaatgaaccgttgctgttgcaggaaagtcatgatgcgataaaagcc
tgcgcacaacagcagggtttcaccgaacatttcaacgttgtgctggataacagtaccgac
tgggacaccgtgtttagtcactgccagtcaatgagtctgttcgccagccgtcagacatta
accttaacgctgccggaaaatggccctaatgccgctatcgctacccagctggagaagctg
agcacgctgctgcacagcgatgtattacccattttaaccggggcgaaattaaccaaagcg
caggagaatagcgcctggttcaaagcttttagcgcgcaggcagtgttggtgccctgcgct
acgccggaacatgcccagctgccgcgctgggttgccgcccgtgccaaagcaatgcagctc
gatctggacgatgccgcctgccagctactctgctactgctatgaaggcaacctgctggcg
ctatcccaggcgctggagcgcctctctctgctctggccggacggcaagctgacgctgccg
cgggtagaacaggcggtcagcgatgccgcccactttacgccgtttcactgggtcgatgcg
ctgctggcgggcaaaagtaaacgtgccctgcatattttgcgtcagctggctgccgaagag
agcgaaccggtgatcctgattcgcacactacagcgtgaactgctgctgttgctgacgctg
caacgccagcagggtaacacgcctttacgcgcgcttttcgatcagcatcgcgtctggcaa
aatcgtcgcgccctgttcagcgaagcgctgcaacggctctctttattacagattcgtcag
gccattcaactgctgacccggctggaaattacactaaaacaggattacgggcagcgcctc
tggccagaactggagaccctgtcactgctgctctgcaataaagcactcccggcagaatta
ggtgaattttaa
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