Mixta intestinalis: C7M51_01406
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Entry
C7M51_01406 CDS
T06391
Symbol
rnb
Name
(GenBank) Exoribonuclease 2
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
mint
Mixta intestinalis
Brite
KEGG Orthology (KO) [BR:
mint00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mint03016
]
C7M51_01406 (rnb)
Enzymes [BR:
mint01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
C7M51_01406 (rnb)
Transfer RNA biogenesis [BR:
mint03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C7M51_01406 (rnb)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
ODP
Motif
Other DBs
NCBI-ProteinID:
QHM71123
UniProt:
A0A6P1PXQ6
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All DBs
Position
1505457..1507388
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AA seq
643 aa
AA seq
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MFQDNPLLAQLKEKLHAQTPRVEGVVKGTEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRV
IAALQTDKDREIVEPETLVEPFLTRFVGRVQKKDDRLSIVPDHPLLKDAIPCRPARSLQH
DFQAGDWAVAEMRRHPLKGDRGFYAELTEFITTGDDHLAPWWVTLSRHNLEREAPAVNFS
EMLDEKLEREDLTALDFVTIDSASTEDMDDALFVEELDDNALRLTIAIADPTAYVPADSE
LDAIAAERAFTNYLPGFNIPMLPRELSDDVCSLRPDERRPALACRVTVAQDGSLSDVHFF
AAWVESKAKLVYDDVSDWLENSGEWQPSSEAIARQIRLLHRICQARVAWRQQHALVFKDR
PDYRFLLGEKGEVLDIIAEPRRIANRIVEEAMIAANICAAMVLREKLGFGIYNVHLGFDA
INAEQAAAVLANHGITADATAMATLEGFRQLRRQLDAQPTQFLDSRIRRFQSFAEISIEP
GPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIIRGESAPRPADEITLKMSERRRLNRMA
ERDVGDWLYARFLQKAAGSDTRFSAEIIDISRGGMRVRLLDNGAVAFIPAPFIHAVRDEL
VCSQESGTVQVKGDVVYRVTDVIEVTIAEVRMETRSIVARPAA
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgttccaggataacccgctgcttgcgcagcttaaagagaagcttcatgcccagacgccg
cgtgtggaaggggtggtaaaaggcaccgaaaaaggtttcggtttcttagaagtcgatgca
caaaaaagctactttattccgccgccgcagatgaagaaagtgatgcatggcgaccgggtg
attgcagcgttgcaaactgacaaagatcgcgaaattgttgagccggaaacgctggtagag
cctttcctgacgcgtttcgttggccgggtgcagaaaaaagacgatcgtctgtcaatcgtc
cctgaccatccgttgctgaaggacgccattccctgccgtccggcgcgcagcctgcagcat
gattttcaggcgggtgactgggcagtggcggaaatgcgtcgccatccgttaaaaggcgat
cgcggtttttacgctgagctgacagaatttattaccaccggtgacgatcatctggcaccg
tggtgggtgacactgtcacgtcataaccttgagcgtgaagcaccagcggttaacttcagc
gaaatgctggatgaaaaactggagcgtgaagatcttaccgcgctggattttgtcactatc
gacagcgccagcacggaagatatggacgatgcattgtttgtcgaagagctggacgataac
gcgctgcgcctgactatcgccatcgccgatcctaccgcttacgtccctgccgacagcgag
ctggacgccattgctgccgaacgcgccttcaccaactatctgccgggctttaatatcccg
atgctgccgcgcgaactttctgacgatgtctgctcgctgcgtcctgatgagcgccgtccg
gcgctggcctgtcgtgtaaccgtcgcccaggatggcagcctgtccgacgtgcatttcttt
gcggcctgggtcgaatctaaagccaagctggtctatgacgacgtctccgactggctggaa
aacagcggtgaatggcagccgtcaagcgaagcgattgcccggcagatccgtctgctacac
cgtatttgccaggcgcgcgtagcgtggcgtcagcaacatgcgctggtgtttaaagatcgt
cccgactatcgcttcctgctgggagaaaaaggcgaagtgctggatatcatcgcagagccg
cgccgtatcgctaaccgtatcgttgaagaagcgatgatcgctgccaatatctgtgccgcg
atggtgctgcgcgagaagcttggtttcggcatctataacgtacatctgggctttgacgcc
attaacgctgagcaggcagccgccgtgctggcgaatcatggcatcacagccgacgcaacc
gcaatggctacgctggaaggtttccgtcagctgcgccgccagctggatgcacagccaacg
cagttcctcgacagccgtattcgtcgtttccagtcctttgcagaaatcagcatcgagccg
ggcccgcactttgggctgggccttgaagcctatgcaacctggacctcaccaattcgtaag
tatggcgatatgatcaatcatcgcctgctgaaagcgattattcgtggtgaaagcgcaccg
cgccctgccgatgaaatcacgctgaaaatgagtgagcgtcgtcgtctgaatcgtatggcc
gagcgcgatgtgggtgactggctctatgcccgtttcctgcaaaaagcggcgggcagcgat
acccgcttcagcgctgagattatcgatatctcccgtggtggtatgcgtgtgcgtctgctg
gataacggtgccgtcgcctttatcccagccccctttatccacgcggtgcgcgatgaactg
gtatgcagccaggaaagcggcacggtgcaggtaaaaggcgacgtggtttatcgcgtgact
gatgttattgaggtgactatcgccgaagttcgtatggaaacccgcagtatcgtggcacgc
cccgctgcctga
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