Mixta intestinalis: C7M51_01853
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Entry
C7M51_01853 CDS
T06391
Symbol
sbcB
Name
(GenBank) Exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
mint
Mixta intestinalis
Pathway
mint03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mint00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
C7M51_01853 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mint03400
]
C7M51_01853 (sbcB)
Enzymes [BR:
mint01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
C7M51_01853 (sbcB)
DNA repair and recombination proteins [BR:
mint03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
C7M51_01853 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C7M51_01853 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C7M51_01853 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QHM71562
UniProt:
A0A6P1PZR9
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All DBs
Position
1941663..1943090
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AA seq
475 aa
AA seq
DB search
MADKQNQPTFLFHDYETFGKSPALDRPAQFAGIRTDMDFNIIGEPEVFYCQPADDYLPQP
EAVMITGITPQQARTRGVNEAEFARRIHALFTVENTCVVGYNNVRFDDEVTRNIFYRNFF
DPYAWSWQNGNSRWDLLDVMRACYALRPDGIHWPENDDGLPSFKLEHLTKANGVEHSHAH
DAMSDVYATIAMAKLVKTKQPKLFDFLFRHRSKQKINTLIDIPQMKPLVHISGMFGALRG
NTSWIAPLAWHPENRNALIVCDLAGDMAPLLELDANALRERLYTPHQQLGSASAVPIKLV
HSNKCPVLAPASTLRPEDAERLGIDRQRCLDNLKLLRQHPEVREKVVAIYAEAEPFTPSE
DVDAQLYNGFFSDADKTAMGIIQQSAPANLPALDLTFNDERIEKLLFRYRARNFPGTLDD
SEQQRWLQHRREVLNGERIEAFLLELESLANLHEGDNDKMAQLKALYEYARELVS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
gtggccgacaagcaaaatcaaccaactttcctttttcatgattatgaaaccttcggcaaa
agtccggcgctcgatcgcccggcgcagtttgccggcattcgtaccgatatggattttaat
atcatcggcgaaccggaggtgttttactgtcagcctgcggatgattatctgccacagccg
gaagcggtcatgattaccggaattacgccacaacaggcacggacgcgcggcgtgaatgaa
gcggaatttgctcgccgcattcatgccctgtttaccgtcgaaaacacctgcgtggtgggc
tacaacaatgtgcgcttcgacgatgaagtaacgcgtaatattttttaccgtaatttcttc
gatccttacgcctggagctggcaaaacggcaattcacgctgggatctgctggatgtaatg
cgcgcctgttacgcgctacgccctgacggtattcactggccggaaaatgatgacgggctg
cccagctttaagttggagcatttgactaaggcgaacggtgtcgaacacagtcacgcacac
gatgcgatgtcagacgtttatgccacgatcgctatggcgaagctggtgaaaactaaacag
ccgaagctgtttgatttcctcttccggcatcgcagcaagcagaagatcaatacgctgatc
gacatcccgcaaatgaagccgctggtgcacatttccggtatgttcggcgcactgcgcggt
aataccagctggatcgcgccactcgcctggcatccggaaaaccgcaatgcgctgatcgtc
tgcgacctcgctggagatatggcgccgttgctggagctggatgccaacgcgctgcgtgaa
aggctttatacgccgcaccagcagttaggcagcgcgtcagccgtaccgattaaactggta
cacagcaataagtgcccggtgctggcacccgccagtacgctgcgtccggaagatgcggag
cgtctgggaatcgatcgacagcgctgtctggataaccttaaattgctgcgtcaacacccg
gaagttcgcgagaaagtcgtcgcaatttatgctgaggccgagccctttaccccttccgaa
gatgttgatgcccagctctataacggttttttcagcgatgccgacaaaaccgcgatgggc
attatccagcagtcggcacctgcgaacctgcccgcgcttgatttaacctttaacgatgaa
cgcattgaaaaactgctgttccgttaccgcgcccgcaacttccccggcacgctggatgac
agcgagcaacagcgctggttacagcatcgacgcgaggtgctgaacggtgagcgtatcgaa
gcatttctgctggagctggagtcgctggcaaatctgcatgagggcgataacgataaaatg
gcgcagctgaaggcgctgtacgagtacgcgcgcgaattagtctcgtaa
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