Mixta intestinalis: C7M51_02397
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Entry
C7M51_02397 CDS
T06391
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
mint
Mixta intestinalis
Brite
KEGG Orthology (KO) [BR:
mint00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mint03009
]
C7M51_02397 (srmB)
Enzymes [BR:
mint01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C7M51_02397 (srmB)
Ribosome biogenesis [BR:
mint03009
]
Prokaryotic type
rRNA helicases
C7M51_02397 (srmB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
AAA_11
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QHM72098
UniProt:
A0A6P1Q276
LinkDB
All DBs
Position
2599185..2600534
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AA seq
449 aa
AA seq
DB search
MTATTFSELELDESLLDALQDKGFSRPTAIQAEAIPAALDGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRVLILTPTRELAMQVADQAQELAKHTQLDIATITGGVAYMNHA
EVFSENQDVVVATTGRLLQYIKEENFDCRAVEILILDEADRMLDMGFAQDIETIAAETRW
RKQTLLFSATLEGEGIKDFAERLLNEPVEIDSDPSRRERKKIQQWYYRADDVAHKTKLLV
HLLKQPEATRSIVFVRKRERVHELVGWLREAGIQASYLEGEMVQAKRNEALKRLMDGRVN
VLVATDVAARGIDVDDVSHVFNFDLPRTADVYLHRIGRTGRAGRKGTALSLVEAHDHLLL
EKISRYISEPLKARTIDELRPVTRAPSQKLKGKPSKKVLAKRKEKEKKKEEEKKPRVKVR
HRDRKNIGKRRKPSAAGQGGNESKKESAE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaaccacattttccgaactcgaacttgatgaaagcctgctggacgctctgcag
gataaaggcttttcccgccccaccgctattcaggccgaagcgattcccgccgcgctggat
ggacgcgacgtgctgggttcagcaccaaccgggaccgggaaaacagctgcctacctgcta
ccagcgctacagcatctgctggactttccgcgtaaaaaatcgggcccgccacgggtgctg
attctgacgccaacgcgcgagctggcaatgcaggtagccgatcaggcgcaggagctggca
aaacatactcagctggatatcgcaacgatcaccggcggcgtggcctatatgaaccatgcc
gaagtattcagcgaaaaccaggatgtggtggtcgccaccacggggcgcctgttgcagtac
atcaaagaagaaaacttcgactgccgggccgtagaaattttgatcctcgacgaagcagat
cgcatgctggatatgggctttgcccaggatattgaaaccatcgccgccgagacgcgctgg
cgtaaacagacgttgctcttttctgccacgctggaaggcgaaggcattaaggacttcgct
gaacgtctgctgaacgaaccggttgaaatcgattccgatccgtcgcgccgcgaacgtaaa
aagatccagcagtggtactatcgtgcggatgacgtcgcgcataaaaccaaactgctggtg
catctgctgaaacagccggaagcgacccgctcaatcgtattcgtgcgcaaacgtgagcgt
gtgcatgagctggtaggctggctgcgtgaggcgggtatccaggcaagctatctggaaggc
gaaatggtgcaggcgaagcgcaacgaagcgctgaagcgcctgatggacggtcgcgttaat
gtgctggtagcaactgacgttgccgcccgcggcattgatgttgatgatgtcagtcacgta
tttaactttgatttaccgcgtaccgcagatgtctatctgcaccgtatcgggcgtaccggg
cgcgccgggcgtaaaggcaccgcgctgtcactggtagaggcgcatgaccatttgctgctg
gaaaaaatcagccgctatatcagcgagccgctaaaagcacgtaccattgacgaactgcgt
ccggttacgcgtgcgcccagccagaagctgaaaggcaagccatcgaaaaaggtactggca
aagcgtaaagagaaagagaagaaaaaagaagaagagaaaaaaccgcgcgttaaggtgcgc
caccgcgaccgtaaaaatatcggtaagcgacgcaaaccgtcggcagcaggccagggcggt
aatgaaagcaagaaagagagtgctgaataa
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