KEGG   Mixta intestinalis: C7M51_03975
Entry
C7M51_03975       CDS       T06391                                 
Symbol
csrD
Name
(GenBank) RNase E specificity factor CsrD
  KO
K18765  RNase E specificity factor CsrD
Organism
mint  Mixta intestinalis
Brite
KEGG Orthology (KO) [BR:mint00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mint03019]
    C7M51_03975 (csrD)
Messenger RNA biogenesis [BR:mint03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     C7M51_03975 (csrD)
SSDB
Motif
Pfam: EAL GGDEF GAPES4
Other DBs
NCBI-ProteinID: QHM73621
UniProt: A0A6P1Q5A6
LinkDB
Position
4270577..4272526
AA seq 649 aa
MRLTTKLSTFIALLITLALVLMVAGCALSFFWLRGERVENQVQTLATEIDRALLMQQVDN
LSPWLRHTMPLLDIEHLEIHTPQSVALKLSRHQHPLLEDAPNRFRRYELPLQHQQGWTLR
VDLLDPADTFFRSFIGSTTLIIMLLVAGVMMLLLVPTHRWLWRQLRGMESLERRAERIIA
GERRGIGRGNVNEWPQKASLALDLLLEDLQEAGEQRIRIDTLIRAFTAQDAATGLNNRLF
FDNQLATLLEDQEKVGTHGVVMMIRLPDFDSLSETWGSAALQEYLFSLVNMLSTFVMRYP
GALLARYFRSDFMVLLPHRTLKEADGIAAQLIKAVDALPPAPMIDRQNMIHIGISAWRSG
QTTQQVLESVEQATRHASLQGGNTWVTGEGSDSDGGRGSVKWRTLLEHTLKRGGPRLYQK
PAVLRNGHVHHRELLPRIFDGEKELLAAEFMPLVQQMGLAEAYDRQLMQNIMKLSLRWPE
ETLAVPVTIDSLLQPGFRRALRDILLQCTKSQRQRFLFELAEAEVCQHFNRLQPALRLLK
GFGCRLAVNQAGLTVVSTSYITLAGVELIKLHPGLVRNIERRTENQLFVKSLLEVCKMTP
TQVFAAGVRTREEWQTLATLGVAGGQGDFFSTSQLVDSNVKKYSQRVRV
NT seq 1950 nt   +upstreamnt  +downstreamnt
atgcgattaaccaccaaactgtcaacgtttatcgcgctacttattactctggcactggtt
ttaatggttgccggctgcgcgctgagttttttctggctgcgcggcgagcgcgtagaaaac
caggtgcagacgctggcaactgaaatcgatcgggcgctgttgatgcaacaggtcgataat
ctttccccctggctgcggcatactatgccgctgctggatattgaacatctggagattcat
acaccacaaagcgtcgcgctgaagctctcgcgccatcagcatccgctgctggaagatgcg
cctaaccgttttcgccgttacgaactgcctctgcaacaccagcagggctggacgttacgt
gtcgacctgctcgatcccgccgatactttcttccgttcctttattggatctaccacgctg
atcattatgttgctggtggcaggcgtaatgatgctgctgctggtgcccacgcaccgctgg
ctctggcggcagttgagagggatggaaagtctggaacggcgcgccgaacggattattgcc
ggtgagcgtcgcggcatcgggcgcggcaatgttaatgaatggccgcaaaaagcgtcgctg
gctctcgatttgttgctggaagatttgcaggaggcgggagagcagcgtatccgcattgat
acgttgatccgcgccttcaccgctcaggatgccgctacggggctgaataaccgcctgttc
tttgacaaccagctggcaacgctgttggaagatcaggagaaagttggcacccacggcgtg
gtgatgatgattcgtctgcctgattttgacagcctgagcgagacgtggggcagcgctgcg
ctacaggaatatctcttttcgctagtgaacatgctttctacttttgttatgcgttatcct
ggcgcgctactggcacgctatttccgcagcgattttatggtgttgttgccgcatcgcacg
ctgaaagaggcagatggcatcgccgcccagctgattaaggccgtggatgcgttaccgcca
gcgccgatgatcgatcggcaaaatatgatccatatcggcatcagcgcctggcgcagcggg
cagacaacgcagcaggtgctggagagcgtagaacaggctacccgtcacgcctcgttgcag
ggagggaacacctgggttaccggtgaaggctcggatagcgacggcgggcgcggcagtgtt
aagtggcgcacgttgctggagcatacgctgaagcgcggcggcccacggctttatcaaaaa
ccggcggtgctgcgtaacgggcatgtccatcaccgtgaactgctgccgcgtatttttgac
ggtgagaaagaactgttggctgccgagtttatgccgctggtgcagcagatgggattggca
gaagcctatgaccgccagctgatgcagaacattatgaaactgtcactgcgctggccagaa
gagacgctggccgtgcccgtcaccatcgactcattattacagccaggtttccgacgcgcg
ctgcgtgatatcctgttgcagtgtacaaaatcgcagcgtcagcgttttttatttgaactt
gcagaggcggaagtgtgtcaacacttcaaccgattgcagccagcgctgcgtttattaaaa
ggttttggctgtcgcctggcggtgaatcaggccgggctgaccgtggttagcacctcttat
attacgctggcaggcgttgagctaatcaagctgcatcccggcctggtacgtaatatcgag
cggcgtacggaaaaccagctgtttgtaaaaagtttactggaagtctgcaagatgacgcca
acgcaggtttttgccgcaggcgtgcgaacgcgagaagagtggcaaacgctggcgacactg
ggcgtggcaggcggtcagggggatttcttttccacttcgcagctggtggatagcaacgtg
aaaaaatattcgcaaagagttcgggtttaa

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