Mixta intestinalis: C7M51_03975
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Entry
C7M51_03975 CDS
T06391
Symbol
csrD
Name
(GenBank) RNase E specificity factor CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
mint
Mixta intestinalis
Brite
KEGG Orthology (KO) [BR:
mint00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mint03019
]
C7M51_03975 (csrD)
Messenger RNA biogenesis [BR:
mint03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
C7M51_03975 (csrD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
Motif
Other DBs
NCBI-ProteinID:
QHM73621
UniProt:
A0A6P1Q5A6
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Position
4270577..4272526
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AA seq
649 aa
AA seq
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MRLTTKLSTFIALLITLALVLMVAGCALSFFWLRGERVENQVQTLATEIDRALLMQQVDN
LSPWLRHTMPLLDIEHLEIHTPQSVALKLSRHQHPLLEDAPNRFRRYELPLQHQQGWTLR
VDLLDPADTFFRSFIGSTTLIIMLLVAGVMMLLLVPTHRWLWRQLRGMESLERRAERIIA
GERRGIGRGNVNEWPQKASLALDLLLEDLQEAGEQRIRIDTLIRAFTAQDAATGLNNRLF
FDNQLATLLEDQEKVGTHGVVMMIRLPDFDSLSETWGSAALQEYLFSLVNMLSTFVMRYP
GALLARYFRSDFMVLLPHRTLKEADGIAAQLIKAVDALPPAPMIDRQNMIHIGISAWRSG
QTTQQVLESVEQATRHASLQGGNTWVTGEGSDSDGGRGSVKWRTLLEHTLKRGGPRLYQK
PAVLRNGHVHHRELLPRIFDGEKELLAAEFMPLVQQMGLAEAYDRQLMQNIMKLSLRWPE
ETLAVPVTIDSLLQPGFRRALRDILLQCTKSQRQRFLFELAEAEVCQHFNRLQPALRLLK
GFGCRLAVNQAGLTVVSTSYITLAGVELIKLHPGLVRNIERRTENQLFVKSLLEVCKMTP
TQVFAAGVRTREEWQTLATLGVAGGQGDFFSTSQLVDSNVKKYSQRVRV
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaaccaccaaactgtcaacgtttatcgcgctacttattactctggcactggtt
ttaatggttgccggctgcgcgctgagttttttctggctgcgcggcgagcgcgtagaaaac
caggtgcagacgctggcaactgaaatcgatcgggcgctgttgatgcaacaggtcgataat
ctttccccctggctgcggcatactatgccgctgctggatattgaacatctggagattcat
acaccacaaagcgtcgcgctgaagctctcgcgccatcagcatccgctgctggaagatgcg
cctaaccgttttcgccgttacgaactgcctctgcaacaccagcagggctggacgttacgt
gtcgacctgctcgatcccgccgatactttcttccgttcctttattggatctaccacgctg
atcattatgttgctggtggcaggcgtaatgatgctgctgctggtgcccacgcaccgctgg
ctctggcggcagttgagagggatggaaagtctggaacggcgcgccgaacggattattgcc
ggtgagcgtcgcggcatcgggcgcggcaatgttaatgaatggccgcaaaaagcgtcgctg
gctctcgatttgttgctggaagatttgcaggaggcgggagagcagcgtatccgcattgat
acgttgatccgcgccttcaccgctcaggatgccgctacggggctgaataaccgcctgttc
tttgacaaccagctggcaacgctgttggaagatcaggagaaagttggcacccacggcgtg
gtgatgatgattcgtctgcctgattttgacagcctgagcgagacgtggggcagcgctgcg
ctacaggaatatctcttttcgctagtgaacatgctttctacttttgttatgcgttatcct
ggcgcgctactggcacgctatttccgcagcgattttatggtgttgttgccgcatcgcacg
ctgaaagaggcagatggcatcgccgcccagctgattaaggccgtggatgcgttaccgcca
gcgccgatgatcgatcggcaaaatatgatccatatcggcatcagcgcctggcgcagcggg
cagacaacgcagcaggtgctggagagcgtagaacaggctacccgtcacgcctcgttgcag
ggagggaacacctgggttaccggtgaaggctcggatagcgacggcgggcgcggcagtgtt
aagtggcgcacgttgctggagcatacgctgaagcgcggcggcccacggctttatcaaaaa
ccggcggtgctgcgtaacgggcatgtccatcaccgtgaactgctgccgcgtatttttgac
ggtgagaaagaactgttggctgccgagtttatgccgctggtgcagcagatgggattggca
gaagcctatgaccgccagctgatgcagaacattatgaaactgtcactgcgctggccagaa
gagacgctggccgtgcccgtcaccatcgactcattattacagccaggtttccgacgcgcg
ctgcgtgatatcctgttgcagtgtacaaaatcgcagcgtcagcgttttttatttgaactt
gcagaggcggaagtgtgtcaacacttcaaccgattgcagccagcgctgcgtttattaaaa
ggttttggctgtcgcctggcggtgaatcaggccgggctgaccgtggttagcacctcttat
attacgctggcaggcgttgagctaatcaagctgcatcccggcctggtacgtaatatcgag
cggcgtacggaaaaccagctgtttgtaaaaagtttactggaagtctgcaagatgacgcca
acgcaggtttttgccgcaggcgtgcgaacgcgagaagagtggcaaacgctggcgacactg
ggcgtggcaggcggtcagggggatttcttttccacttcgcagctggtggatagcaacgtg
aaaaaatattcgcaaagagttcgggtttaa
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