Mixta intestinalis: C7M51_04020
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Entry
C7M51_04020 CDS
T06391
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
mint
Mixta intestinalis
Pathway
mint02020
Two-component system
mint02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mint00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C7M51_04020 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C7M51_04020 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mint03021
]
C7M51_04020 (rpoN)
Transcription machinery [BR:
mint03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C7M51_04020 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
QHM73665
UniProt:
A0A6P1Q784
LinkDB
All DBs
Position
complement(4325064..4326500)
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AA seq
478 aa
AA seq
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MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALESNPLLEQTDNIHEEVESR
EAPESEMLDTREALEQKDMPEELPLDATWDEIYTAGTPSGTGTDYRDDELPVYQGETTQS
LQDYLMWQVELTPFTDTDRAIATSIVDAIDDTGYLTVTLEDIRDSMGDEEIALDEVEAVL
KRIQRFDPVGVGARDLRDCLLVQLSQFAADTPWLAEAQLIVSEHLDLLANHDFRSLMRIT
RLKEEVLKEAMALIQSLDPRPGQSVNTGEPEYVIPDVLVRKTGNRWTVELNSDSVPRLKI
NQQYAALGSSARNDSDSQFIRTNLQEAKWLIKSLESRNDTLLKVTRCIVEQQQAFFEQGE
EFMRPMVLADIAQAVDMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTA
IRALVKKLISAENPAKPLSDSKLTAMLSDQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaactcaggctcagccaacagctcgccatgacaccgcagctgcaa
caggcaattcgtttgctgcagctttcgacgctggaacttcaacaggagattcagctggcg
ctggagagcaacccgttgcttgagcagaccgataatatccacgaagaggttgagtctcgc
gaggcgccggagagcgaaatgctcgatacgcgagaagcgcttgagcaaaaggatatgccg
gaagagttgccgcttgatgccacatgggatgaaatttataccgcaggtacgccatcaggt
accggcaccgactaccgtgacgatgagcttccggtctatcagggagaaaccacgcagtcg
ctgcaggactatctgatgtggcaggtagagctaacgccgtttaccgacaccgatcgcgct
attgccacctctattgtcgatgctatcgacgataccggttatcttaccgttacgctggaa
gatattcgcgacagcatgggcgatgaagagattgcgctggatgaagtcgaggcggtgtta
aaacgaatccagcgtttcgatcccgtcggcgtaggcgctcgtgacctgcgcgactgcctg
ctggtgcagctttcccagttcgccgccgatacaccgtggctcgcggaggcgcagctaatc
gtcagcgagcatcttgatctgctggctaatcacgatttccgcagcctgatgcgcataacc
cggttgaaagaagaagtattaaaagaggcgatggcgctgattcagtcactcgatccacgc
ccgggtcagtcggtcaataccggtgagccggagtatgtgatcccggatgtgctggtacgt
aaaacgggtaaccgctggacggtggagttaaacagcgatagcgtgccgcgtctgaaaatt
aatcagcaatatgccgcgctgggcagttcagcacgcaacgacagcgacagccagtttatt
cgtactaatctgcaagaagctaagtggctgattaaaagccttgaaagccgcaacgatacg
ttacttaaggtcacgcgctgtattgttgaacagcagcaggctttctttgagcagggcgaa
gaatttatgcgcccgatggtgctggcagatattgcccaggccgtagatatgcatgaatca
accatttctcgcgtgactacgcaaaaatatttgcacagtccacgcggaatctttgagctg
aaatattttttctccagccacgtcaataccgaaggcggtggcgaagcctcgtcaacggcg
attcgcgcgctggtaaaaaaactcatctcggcggaaaaccccgccaaaccgctgagcgac
agcaagctcactgccatgctgtccgatcagggcattatggtagcgcgccgcaccgtcgcg
aagtatcgagagtctttatctatcccgccatcaaatcagcgtaaacagctggtttga
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