KEGG   Mixta intestinalis: C7M51_04020
Entry
C7M51_04020       CDS       T06391                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
mint  Mixta intestinalis
Pathway
mint02020  Two-component system
mint02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:mint00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    C7M51_04020 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    C7M51_04020 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mint03021]
    C7M51_04020 (rpoN)
Transcription machinery [BR:mint03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     C7M51_04020 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: QHM73665
UniProt: A0A6P1Q784
LinkDB
Position
complement(4325064..4326500)
AA seq 478 aa
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALESNPLLEQTDNIHEEVESR
EAPESEMLDTREALEQKDMPEELPLDATWDEIYTAGTPSGTGTDYRDDELPVYQGETTQS
LQDYLMWQVELTPFTDTDRAIATSIVDAIDDTGYLTVTLEDIRDSMGDEEIALDEVEAVL
KRIQRFDPVGVGARDLRDCLLVQLSQFAADTPWLAEAQLIVSEHLDLLANHDFRSLMRIT
RLKEEVLKEAMALIQSLDPRPGQSVNTGEPEYVIPDVLVRKTGNRWTVELNSDSVPRLKI
NQQYAALGSSARNDSDSQFIRTNLQEAKWLIKSLESRNDTLLKVTRCIVEQQQAFFEQGE
EFMRPMVLADIAQAVDMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTA
IRALVKKLISAENPAKPLSDSKLTAMLSDQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgaagcaaggtttgcaactcaggctcagccaacagctcgccatgacaccgcagctgcaa
caggcaattcgtttgctgcagctttcgacgctggaacttcaacaggagattcagctggcg
ctggagagcaacccgttgcttgagcagaccgataatatccacgaagaggttgagtctcgc
gaggcgccggagagcgaaatgctcgatacgcgagaagcgcttgagcaaaaggatatgccg
gaagagttgccgcttgatgccacatgggatgaaatttataccgcaggtacgccatcaggt
accggcaccgactaccgtgacgatgagcttccggtctatcagggagaaaccacgcagtcg
ctgcaggactatctgatgtggcaggtagagctaacgccgtttaccgacaccgatcgcgct
attgccacctctattgtcgatgctatcgacgataccggttatcttaccgttacgctggaa
gatattcgcgacagcatgggcgatgaagagattgcgctggatgaagtcgaggcggtgtta
aaacgaatccagcgtttcgatcccgtcggcgtaggcgctcgtgacctgcgcgactgcctg
ctggtgcagctttcccagttcgccgccgatacaccgtggctcgcggaggcgcagctaatc
gtcagcgagcatcttgatctgctggctaatcacgatttccgcagcctgatgcgcataacc
cggttgaaagaagaagtattaaaagaggcgatggcgctgattcagtcactcgatccacgc
ccgggtcagtcggtcaataccggtgagccggagtatgtgatcccggatgtgctggtacgt
aaaacgggtaaccgctggacggtggagttaaacagcgatagcgtgccgcgtctgaaaatt
aatcagcaatatgccgcgctgggcagttcagcacgcaacgacagcgacagccagtttatt
cgtactaatctgcaagaagctaagtggctgattaaaagccttgaaagccgcaacgatacg
ttacttaaggtcacgcgctgtattgttgaacagcagcaggctttctttgagcagggcgaa
gaatttatgcgcccgatggtgctggcagatattgcccaggccgtagatatgcatgaatca
accatttctcgcgtgactacgcaaaaatatttgcacagtccacgcggaatctttgagctg
aaatattttttctccagccacgtcaataccgaaggcggtggcgaagcctcgtcaacggcg
attcgcgcgctggtaaaaaaactcatctcggcggaaaaccccgccaaaccgctgagcgac
agcaagctcactgccatgctgtccgatcagggcattatggtagcgcgccgcaccgtcgcg
aagtatcgagagtctttatctatcccgccatcaaatcagcgtaaacagctggtttga

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