Mixta intestinalis: C7M51_04067
Help
Entry
C7M51_04067 CDS
T06391
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mint
Mixta intestinalis
Pathway
mint03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mint00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C7M51_04067 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mint03019
]
C7M51_04067 (deaD)
03009 Ribosome biogenesis [BR:
mint03009
]
C7M51_04067 (deaD)
Enzymes [BR:
mint01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C7M51_04067 (deaD)
Messenger RNA biogenesis [BR:
mint03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C7M51_04067 (deaD)
Ribosome biogenesis [BR:
mint03009
]
Prokaryotic type
rRNA helicases
C7M51_04067 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
DbpA
ResIII
DeaD_C
Cas3-like_C_2
CMS1
DRTGG
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QHM73710
UniProt:
A0A6P1Q3S9
LinkDB
All DBs
Position
4372509..4374392
Genome browser
AA seq
627 aa
AA seq
DB search
MTDIQTTFSDLGLNEAILTALNDMGYEKPSPIQAACIPHLLEGRDVLGMAQTGSGKTAAF
ALPLLNNIDTELKAPQILVLAPTRELAVQVAEACNDFSKHMRGVNVLALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLRGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKDPQEVRIQSSVTTRPDISQSYWTVWGRKTDALVRFLE
AEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIA
TDVAARGLDVDRISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIE
RTMKLTIPEVELPNAELLSTRRLAKFAAKVQQQLESSDLEQYRALLSQLSPESDLDMETL
AAALLKMAQGERPLILPPDAPRPQRREFRERDDRRGSRDARSDSRDGDRPRRERRDVGDM
ELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMPGEILQHFT
RTRILNKPMNMQLLGDAQPHERADRGERRGGRGGFGGERREGGREGGGRRFSERREGGGR
SFNREGGNRGPRREDSAGTGAVRRRDY
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgactgatattcaaaccactttttccgatctgggccttaacgaagctatcctcaccgct
ctgaatgacatgggctatgagaagccatcgccaatccaggccgcctgtatcccacatctg
ctggaaggccgcgatgtgctgggtatggcacaaaccggtagtggcaaaaccgcagcgttc
gcattaccgctgctgaacaatatcgacactgaattgaaagcaccgcagatcctggtgctg
gcaccgacgcgtgagctggcggtgcaggttgcagaagcctgcaacgatttttctaaacat
atgcgcggcgtaaacgtgctggccctgtatggcggccaacgttatgacgtgcagctgcgc
gctctgcgtcaggggccgcagattgtcgtaggtacgccggggcgtctgctggaccacctg
aaacgcggcacgctggatctctccaaactgcgcggtctggtgctcgacgaagcagatgaa
atgctgcgtatgggctttatcgaagacgtggaaaccatcatggcgcagatcccggaaggt
catcagaccgctctgttctctgccaccatgccggaagcgattcgtcgcattacccgtcgc
tttatgaaagatccgcaggaagtgcgcattcagagcagcgtcactacgcgtcctgacatc
agccagagctactggaccgtctggggccgtaaaaccgatgcgctggtacgtttcctggaa
gcggaagattttgatgctgctatcatcttcgtacgtactaaaaacgctacgctggaagtg
gctgaagcgctggagcgcagcggttacaacagcgccgcgctgaacggtgatatgaaccag
gcgctgcgtgagcagacgctggagcgtttgaaagatggtcgtctggatatcctgatcgcg
actgacgtagcggctcgtggccttgacgttgatcgtatcagtctggtagttaactacgat
atcccgatggattctgaatcctacgttcaccgtatcggtcgtaccggtcgtgctggccgt
gccggtcgcgcactgctgttcgtggaaaaccgtgaacgtcgcctgctgcgcaacatcgag
cgcaccatgaagctgaccattccggaagtagagctgccgaatgcggaactgctgagcacc
cgccgtctggcgaagttcgcggctaaagtacagcagcagctggaaagcagcgatctggaa
cagtaccgtgcgctgctgagccagctgtctccagaaagcgatctggatatggaaacgctg
gccgccgcgttgctgaaaatggcgcagggcgaacgtccgctgattctgccgccggatgca
ccgcgtccgcaacgtcgtgaattccgtgagcgtgacgatcgtcgcggtagccgtgacgca
cgtagcgacagccgtgatggcgatcgtccacgtcgtgaacgtcgtgacgttggcgatatg
gaactgtaccgcattgaagtgggccgtgatgatggtgttgaagttcgtcacatcgtgggc
gctatcgctaacgaaggcgatatcagcagccgttacatcggtaacatcaagctgtttgct
tctcactcaacgattgagctgccgaaaggtatgccgggtgaaatcctgcaacactttacc
cgcacgcgtattctcaacaaaccgatgaatatgcagctgctgggcgatgcgcagccgcac
gaacgtgccgatcgtggtgaacgtcgcggtgggcgtggtggttttggcggtgaacgccgt
gaaggcggtcgcgaaggtggcggtcgtcgcttcagcgaacgtcgtgaaggcggcggtcgc
agcttcaaccgcgaaggcggtaatcgtggtccgcgtcgtgaagatagcgccggtaccggt
gctgtacgccgtcgcgattactaa
DBGET
integrated database retrieval system
