Microbacterium invictum: T9R20_11840
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Entry
T9R20_11840 CDS
T09642
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
minv
Microbacterium invictum
Pathway
minv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
minv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
T9R20_11840 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
minv03021
]
T9R20_11840 (rho)
03019 Messenger RNA biogenesis [BR:
minv03019
]
T9R20_11840 (rho)
Transcription machinery [BR:
minv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
T9R20_11840 (rho)
Messenger RNA biogenesis [BR:
minv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
T9R20_11840 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
AAA_25
NACHT
Spore_III_AA
PIP5K
AAA_22
Mor
Motif
Other DBs
NCBI-ProteinID:
WQB69389
UniProt:
A0ABZ0V7E2
LinkDB
All DBs
Position
complement(2445653..2447833)
Genome browser
AA seq
726 aa
AA seq
DB search
MESISEVHTPDDTTDERADAPADAATDPNTTPDNPADAEAPTDADASAEGADAAAAAAPE
ESPAADPADAPAAEGAPAEDAAAEEAPAETAPRKRAPRRAKTEGVTATTRPKRTRATKAS
AAADAAAADAASAAEVEPAAAEPTADQPAADQPAADQPAEDQPAAGEAGASGSETAADIA
ASDETPSGATATPDAAPGGDGAAEPEAAAAAQSDDAPAAPESGDADSRDDSADETPSRGR
SRNRSRNRNRGGQNGNAQEAGNGQGTQNQGAQNQGGNGRGAQNQNGGTPANAGPEASDDD
TSSTGGRGRQRNKRRGQGPVDEFETEINEDDVLIPIAGILDVLDNYAFVRTTGYLPGPQD
VYVSLGQVKKYNLRKGDAVVGSIKQPREGEQSSRQKYNALVKVDAVNGLSVDDAAERVEF
GKLTPLYPQERLRLETAPEKLTQRIIDLVAPIGKGQRGLIVAPPKAGKTIVLQQIANAIA
TNNPEVHLMVVLVDERPEEVTDMQRTVRGEVIASTFDRPAEDHTTVAELAIERAKRLVEL
GRDVVVLLDSITRLGRAYNISAPTSGRVLTGGVDASALYPPKRFFGAARNIENGGSLTIL
ATALVETGSKMDEVIFEEFKGTGNSELRLNRQLADKRIFPAVDVNASSTRREEMLMSADE
VKITWKLRRALAGLDPQQALEVVLGKLKETGSNVEFLVQMQKSMPAPTQGGHGGHGGSHG
HDNSIR
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
gtggagtccatctccgaggtccacacccctgacgacaccaccgacgagcgcgcagacgcg
cccgcggacgccgccacggacccgaacaccacccctgacaacccggctgacgccgaagct
ccgaccgacgccgacgcgtcggccgagggcgcggatgccgccgctgcggcggctccggag
gaatcaccggccgctgaccccgccgacgcaccggccgctgagggcgcccccgccgaggac
gcggctgcggaggaggctccggcggagaccgcgccgcgcaagcgcgcgccccgtcgagca
aagaccgagggcgtgaccgcgaccacccgccccaagcgcacccgcgccaccaaggccagc
gcggccgccgacgccgccgctgcggacgccgcatccgcggccgaggtcgagcccgccgca
gccgagcccaccgctgaccagccggctgccgaccagcctgccgccgaccagcccgcggaa
gaccagcccgccgccggcgaggccggagcttcggggtccgagaccgccgcagacatcgcg
gcatccgacgagaccccctccggggccaccgcgacccctgacgccgccccgggcggcgac
ggtgcagcggaacccgaggcggctgccgccgcgcagtccgacgacgcgccggccgcgccc
gagagcggcgacgccgactcccgcgacgacagcgccgacgagaccccgtcccgcggacgg
agccgcaaccgcagccgcaaccgcaaccgcggcggccagaacggcaacgcccaggaggcc
ggcaacggccagggcacccagaaccagggcgctcagaaccagggcggaaacggtcgtggg
gcgcagaaccagaacggcggcacccctgccaacgccggcccggaggcctccgacgacgac
acctcgtcgacgggcggtcggggacgccagcgcaacaagcgccgcggtcagggcccggtc
gacgagttcgagaccgagatcaacgaggacgacgtcctcatcccgatcgcgggcatcctc
gacgtgctcgacaactacgcgttcgtccgcaccaccgggtacctccccggcccgcaggac
gtctacgtctcgctcggccaggtgaagaagtacaacctgcgcaagggcgacgcggtcgtc
ggctcgatcaagcagccgcgcgagggtgagcagtccagccgccagaagtacaacgcgctg
gtcaaggtcgacgccgtgaacggtctgtcggtcgacgacgccgccgagcgcgtcgagttc
ggcaagctcacgccgctctacccccaggagcgcctgcgcctggagaccgcgcccgagaag
ctgacgcagcgcatcatcgacctcgtcgccccgatcggcaagggtcagcgcggcctcatc
gtcgccccgcccaaggccggcaagacgatcgtgctgcagcagatcgccaacgccatcgcg
accaacaaccccgaggtgcacctgatggtcgtgctcgtcgacgagcgccccgaagaggtc
accgacatgcagcggacggttcgcggcgaggtcatcgcctcgaccttcgaccgccccgcc
gaggaccacaccacggtcgccgagctcgccatcgagcgtgcgaagcgcctggtggagctc
ggtcgcgatgtcgtcgtgctgctcgactcgatcacgcgcctcggccgtgcctacaacatc
tcggcgcccacctcgggtcgcgtgctcaccggcggggtcgacgcctcggcgctgtacccg
cccaagcgcttcttcggcgcggcacgcaacatcgagaacggcggttcgctcacgatcctc
gccacggcgctggtcgagaccggctcgaagatggacgaggtgatcttcgaggagttcaag
ggcaccggcaacagcgagctgcgtctgaaccgccagctcgccgacaagcgcatcttcccc
gccgtcgacgtcaacgcctcgtcgacgcgtcgggaggagatgctgatgtcggcggacgag
gtcaagatcacctggaagctccgccgcgccctcgcgggcctggacccccagcaggcgctg
gaggtcgtgctcggcaagctcaaggagacgggctcgaacgtggagttcctcgtccagatg
cagaagtcgatgccggctcccacccagggcggtcacggcggccacggcggcagccacggt
cacgacaacagcatccgctga
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