Microbacterium invictum: T9R20_15130
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Entry
T9R20_15130 CDS
T09642
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
minv
Microbacterium invictum
Pathway
minv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
minv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
T9R20_15130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
minv03021
]
T9R20_15130
03400 DNA repair and recombination proteins [BR:
minv03400
]
T9R20_15130
Enzymes [BR:
minv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
T9R20_15130
Transcription machinery [BR:
minv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
T9R20_15130
DNA repair and recombination proteins [BR:
minv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
T9R20_15130
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
WQB70011
UniProt:
A0ABZ0V9J5
LinkDB
All DBs
Position
complement(3143305..3146802)
Genome browser
AA seq
1165 aa
AA seq
DB search
MAAAPNASNPTTTPKNGRGASRLSFAKISDTLTVPDLLALQTESFDWLVGNEQWRARVAE
AKAAGRTDVPEVSGLEEIFEEISPIEDLSETMQLSFTNPYLEPEKYSIEECKERGKTYAA
PLYVEAEFMNHQTGEIKTQTVFMGDFPLQTDKGTFIINGTERVVVSQLVRSPGVYFDKTP
DKTSDKDIVSARIIPSRGAWLEFEIDKRDQVGVRIDRKRKQSVTVFLKALGLSSEDILNE
FAGFDSIEETLSKDTILSKEDALRDIYRKLRPGEQVAAEAARALLDNFYFNPKRYDLAKV
GRYKINQKLGLDAPLSDSVLTVDDIVATIKYLVRVHRGDETFEGVRGGKNVEIRLDVDDI
DNFGNRRIRAVGELIQNQVRTGLSRMERVVRERMTTQDIEAITPQTLINVRPVVAAIKEF
FGTSQLSQFMDQNNPLAGLTHKRRLSALGPGGLSRERAGVEVRDVHPSHYGRMCPIETPE
GPNIGLIGSLASFARINSFGFIETPYRKVVDGKVTDQIDYLTASEESDYIIAQANAPLKA
DGHFQEDRVLARKIGGEVDLIPADEIGYMDVSPRQMVSVATSLIPFLEHDDANRALMGAN
MQRQAVPLLRSESPVVGTGMEGYAAVDAGDVVTAEKSGVVMEVSADVVTIQLDEGGTQDY
FLRKFDRSNQGTSYNQRVIVSAGDRIEAGEVIADGPATENGELALGKNLLVAFMTWEGHN
FEDAIILSQDLVKDDTLSSIHIEEYEVDARDTKLGKEEITRDLPNVSPDLLKDLDERGII
RIGAEVRPGDILVGKVTPKGETELSAEERLLRAIFNEKSREVRDTSLKVPHGEQGTIIAV
KEFNAEDGDDELGSGVNRRVVVYIAQKRKITEGDKLAGRHGNKGVIAKILPVEDMPFLAD
GTPVDVVLNPLGIPGRMNFGQVLETHLGWIAKQGWKVEGTPEWAVRLPEEAREAAPGTKV
ATPVFDGAAEEEIAGLLDSTTLTRDGVRLIDSTGKTQLFDGRSGEPFPAPISVGYMYILK
LHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIK
SDDIPGRVKAYESIVKGENLQEPGIPESFKVLMKEMQSLCLNVEVLSADGTVVSLRDSTD
EAYRAAEELGINISSRFESSSIDEI
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
ttggctgctgcgcccaacgcatccaatcccaccaccacccccaagaacggccgcggcgca
tcgcggctctcgttcgcgaagatctccgacacgctgacggttcccgaccttctcgcgctg
cagaccgagtccttcgactggctcgtcggcaacgagcagtggcgtgcccgcgtggccgag
gccaaggccgccggtcgcaccgacgtccccgaggtgagcggactggaggagatcttcgag
gagatctcgccgatcgaggacctgagcgagaccatgcagctctcgttcaccaacccctac
ctcgagcccgagaagtactcgatcgaagagtgcaaggagcgcggcaagacttacgccgcc
ccgctctacgtcgaggccgagttcatgaaccaccagaccggtgagatcaagacccagacg
gtcttcatgggcgacttcccgctccagaccgacaagggcacgttcatcatcaacggcacc
gagcgtgtcgtggtctcgcagctcgtgcgctctcccggtgtctacttcgacaagacgccc
gacaagacctccgacaaggacatcgtgtccgcgcggatcattccgtcgcgcggcgcatgg
ctcgagttcgagatcgacaagcgcgaccaggtcggcgtgcgcatcgaccgcaagcgcaag
cagtcggtcacggtgttcctgaaggccctgggcctgtcgagcgaagacatcctgaacgag
ttcgccggcttcgactccatcgaggagaccctctccaaggacaccatcctgtccaaggag
gacgccctccgcgacatctaccgcaagctccgtccgggcgagcaggtcgccgccgaggcc
gcccgcgcgctcctggacaacttttacttcaaccccaagcgctacgacctggcgaaggtg
ggtcgttacaagatcaaccagaagctgggtctggatgctccgctgtcggactcggtgctg
accgtcgacgacatcgtcgccaccatcaagtacctcgtgcgcgtgcaccgcggcgacgag
accttcgagggcgtgcgcggcggcaagaacgtcgagatccgtcttgacgtcgacgacatc
gacaacttcggcaaccgtcgcatccgcgcggtcggcgagctgatccagaaccaggtccgc
acggggctctcgcgcatggagcgcgtcgtccgcgagcgcatgaccacgcaggacatcgag
gcgatcaccccgcagaccctgatcaacgtccgccccgtggtggccgcgatcaaggagttc
ttcggcacctcgcagctgtcgcagttcatggaccagaacaacccgctcgcgggtctgacc
cacaagcgacgcctctcggcgctcggccccggcggtctgtcgcgcgagcgcgccggcgtc
gaggtccgtgacgtccacccctcgcactacggccgcatgtgcccgatcgagactccggaa
ggcccgaacatcggtctgatcggatcgctggcctcgttcgcccgcatcaactcgttcggt
ttcatcgagaccccgtaccgcaaggtcgtcgacggcaaggtcaccgaccagatcgactac
ctcacggccagcgaggagagcgactacatcatcgcccaggccaacgcccccctgaaggcg
gacggccacttccaggaggaccgggtcctcgcgcggaagatcggcggcgaggtcgacctc
atccccgccgacgagatcggctacatggacgtctcgccgcgccagatggtgtcggtcgcg
acatccctcatccccttcctggagcacgacgacgccaaccgcgcgctcatgggcgcgaac
atgcagcgtcaggctgtgccgctgctgcgcagcgaatcgcccgtggtgggaaccggtatg
gagggctacgccgccgtcgacgccggtgacgtcgtcaccgccgagaagagcggtgtggtc
atggaggtgtcggccgacgtcgtcaccatccagctcgacgagggcggcacgcaggactac
ttcctgcgcaagttcgaccggtccaaccagggcacgagctacaaccagcgcgtgatcgtc
tcggcgggcgaccgcatcgaggccggcgaggtcatcgccgacggcccggcgaccgagaac
ggcgagctcgcgctcggcaagaacctgctcgtggcgttcatgacctgggagggtcacaac
ttcgaggacgccatcatcctcagccaggacctggtgaaggacgacaccctctcgtcgatc
cacatcgaggagtacgaggtcgacgcccgcgacaccaagctcggcaaggaggagatcacc
cgtgatctccccaacgtcagccccgacctgctgaaggacctcgacgagcgcggcatcatc
cgcatcggcgccgaggtccgccccggcgacatcctcgtcggcaaggtcacgcccaagggc
gagaccgagctgagcgccgaggagcgcctgctgcgcgcgatcttcaacgagaagagccgt
gaggtgcgcgacacgtcgctgaaggtcccccacggcgagcagggcacgatcatcgccgtc
aaggagttcaacgccgaggacggcgacgacgagctcggctcgggcgtgaaccgccgcgtc
gtggtctacatcgcccagaagcgcaagatcaccgagggcgacaagctcgccggccgccac
ggcaacaagggcgtcatcgccaagatcctgccggtcgaggacatgccgttcctcgccgac
gggacgccggtcgacgtcgtcctgaacccgctcggcatccccggtcgcatgaacttcggc
caggtgctcgagacccacctcgggtggatcgccaagcagggctggaaggtcgagggcacc
cccgagtgggcggtgcgcctgcccgaggaggctcgcgaggccgcccccggcacgaaggtc
gccaccccggtgttcgacggtgccgccgaggaagagatcgcgggtctgctcgactccacg
accctcacccgcgacggtgtgcgcctgatcgactccacgggcaagacccagctgttcgac
ggccggtcgggggagcccttccccgctccgatctccgtcgggtacatgtacatcctgaag
ctgcaccacctcgtggacgacaagatccacgcccgttccaccggcccctactcgatgatc
acgcagcagccgctgggtggtaaggcgcagttcggcggccagcggttcggtgagatggag
gtgtgggcactcgaggcctacggcgccgcatacgcgctgcaggagctcctcacgatcaag
tccgacgacatccccggccgcgtcaaggcgtacgagtcgatcgtcaagggcgagaacctg
caggagcccggcatccccgagtcgttcaaggtgctcatgaaggagatgcagtcgctgtgc
ctgaacgtcgaggtcctctcggcggacggcaccgtggtcagcctccgcgacagcaccgac
gaggcctatcgcgccgctgaggagctcggcatcaacatctcgagccgcttcgagtcgtcg
tcgatcgacgagatctga
DBGET
integrated database retrieval system
