Minwuia sp. contig_746: ACMVY4_08670
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Entry
ACMVY4_08670 CDS
T11151
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
minw Minwuia sp. contig_746
Pathway
minw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
minw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACMVY4_08670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minw03019
]
ACMVY4_08670
Enzymes [BR:
minw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACMVY4_08670
Messenger RNA biogenesis [BR:
minw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACMVY4_08670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HEM4
Utp25_C
ERCC3_RAD25_C
AAA_19
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
XOY54125
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All DBs
Position
1792324..1793670
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AA seq
448 aa
AA seq
DB search
MTNFTELGLAEPLLRALADEGYDQPTPIQQKAIPVLMNGGDIVGIAQTGTGKTAAFVLPI
LNVIAGDRRRPDNKTCRSLIVAPTRELAVQIADNVRKYAAHMRISVTMVTGGVKAGPQIK
GLARGVDVLVATPGRLLDHMSTGAVRLNACEMVVLDEADQMLDMGFIPAIRKIMAAMPKE
RQTALFSATMPKPIRALANDFLSGPKEISVAPAATPIERIEQTVLPVPSAEKRDALVRLI
DEHDVERAIVFTRTKHGADRVARHLEQAGIETGAIHGNKNQSQRQRTLNAFKTGEIQVLV
ATDVAARGIDIPDVSHVINFELPNVPESYVHRIGRTARAGKEGVAISLCAPDERGLLRDI
EKVTGLDFGLPGGERPQRRQNQKPRGRGGKPGGESGPRKHAGGPGGKPNRGQGEGRPGQP
EAPPQPQWRQRPASAPGGVTTATVVSRA
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
ttgaccaattttactgaactcggcctggccgagcccctccttcgcgcgcttgccgacgaa
ggctacgaccagccgaccccgatccagcagaaggccatcccggtcctgatgaacggtggc
gacatcgtcggcatcgcccagaccggcaccggcaagaccgccgccttcgtgctgccgatc
ctgaacgtcatcgccggcgaccgccgccggcccgacaacaagacctgccgcagcctgatc
gtcgcgccgacgcgcgaactggccgtgcagatcgccgacaatgtccgcaagtacgcggcc
cacatgcgcatctccgtcaccatggtgaccggcggcgtgaaggccggcccgcagatcaag
ggcctggcgcgcggcgtcgacgtgctggtcgcgaccccgggccgcctgctggaccacatg
tccaccggcgcggtgcggctgaacgcctgcgagatggtggtcctcgacgaggccgaccag
atgctggatatgggcttcatcccggccatccggaagatcatggcggcgatgccgaaggag
cgtcagacggcgctgttctcggccaccatgccgaagccgatccgggcgctggccaacgac
ttcctgtcgggcccgaaggagatctccgtcgcccccgccgcgaccccgatcgagcgcatc
gagcagaccgttctgccggtgccgtcggccgagaagcgcgacgcgctggtccgcctgatc
gacgagcatgacgtcgagcgcgccattgtcttcacccgcaccaagcatggcgccgaccgc
gtcgcccgccatctggagcaggccggcatcgagaccggcgccatccacggcaacaagaac
cagagccagcgccagcgcaccctgaacgccttcaagaccggcgagatccaggtgctggtg
gcgacggacgtggccgcgcgcggtatcgacatcccggatgtcagccacgtcatcaacttc
gagctgccgaacgtgccggaatcctacgtccaccgcatcggccgcacggcccgcgcgggc
aaggaaggcgtggcgatctcgctctgcgcccctgacgagcgcggcctgctgcgcgacatc
gagaaggtcacgggcctcgatttcggcctgccgggcggcgaacgcccccagcggcgccag
aaccagaagccccgcggtcgtggcggcaagcccggcggcgagagcggcccgcgcaagcat
gccggcggtccgggcggcaagcccaaccgcggccagggcgaagggcggccagggcaaccg
gaagccccgccgcaaccgcaatggcggcagcggccggcctcagcgccaggcggcgtgacg
acagctacggtggtgtcccgggcctga
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