Microbacterium sp. Nx66: MICNX66_0712
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Entry
MICNX66_0712 CDS
T11414
Symbol
rtcB
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
minx Microbacterium sp. Nx66
Brite
KEGG Orthology (KO) [BR:
minx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
minx03016
]
MICNX66_0712 (rtcB)
Enzymes [BR:
minx01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
MICNX66_0712 (rtcB)
Transfer RNA biogenesis [BR:
minx03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
MICNX66_0712 (rtcB)
Prokaryotic type
tRNA splicing ligases
MICNX66_0712 (rtcB)
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Other DBs
NCBI-ProteinID:
CAD5138162
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Position
Nx66:complement(729300..730469)
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AA seq
389 aa
AA seq
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MERLSARLLSWASLIDEKTLDQARTTSRMPFIHPHLALMPDAHLGKGATVGSVIPTLGAI
IPAAVGVDIGCGMIAVRTPFTKDDLDGRDLAALREQIERAVPLSAGRYNNKVVGTAAPRV
VELEERATAAEFDPEGYAKNWRLQLGTLGSGNHFIEVSADELDRVWLFLHSGSRGVGNRI
AGHHIAVAQRLAKQWWIDLPDPDLAYLVEGTPEFTRYIRELRWAQHFALLNREEMMDRVI
RQLSEFLGTPVEEEERINCHHNFTESEMHFGKRVWVSRKGAIQADAGRPGLIPGSMGTAS
YVVEGLGDPLSLNSSPHGAGREYSRSAARKTFTHAQLREAMAGIEFRDTDAFIDEIPQAY
KPIDRVMADAASLVRIRHTLRQLVNVKGD
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggagaggctctccgcgcggctgctgtcgtgggcgtccctgatcgatgagaagaccctc
gatcaggcgcgcaccacctcacgcatgccgttcatccacccgcacctggcgctgatgccg
gatgcgcacctcggcaagggggcgaccgtcgggtcggtcatcccgacgctcggcgcgatc
atccccgccgccgtcggggtcgacatcggctgcggcatgatcgccgtccgcacgccgttc
acgaaggacgacctcgacgggcgcgacctcgccgcgctccgggagcagatcgagcgcgcg
gtcccgctgtctgccgggcgctacaacaacaaggtcgtggggacggccgctcctcgcgtg
gtcgagctggaggagcgggccaccgcggccgagttcgaccccgagggctacgcgaagaac
tggcggctccagctcggcaccctcgggtcgggaaaccacttcatcgaggtgtcggcggat
gaactcgaccgggtctggctgttcctgcattccggttcccgcggcgtgggcaacaggatc
gccgggcaccacatcgccgtcgcacagcgtctggcgaagcaatggtggatcgacctcccc
gaccccgacctggcctacctcgtcgagggcacgccggagttcacccgctacatccgggag
ctcaggtgggcgcagcacttcgcgctgctgaaccgcgaggagatgatggaccgcgtcatc
cggcagctctccgagttcctcggcaccccggtcgaggaggaggagcggatcaactgccac
cacaacttcacggagtcggagatgcacttcgggaagcgcgtctgggtgtcccggaagggc
gcgatccaggcggatgcgggtcggcccggactcatccccgggtcgatgggcacggcgtcc
tacgtggtggaagggctcggcgacccgctgtcgctgaactcgtcaccgcacggcgccggg
cgcgagtactcgcggtccgcggcccggaagacgttcacgcatgcgcagctgcgcgaggcg
atggccggcatcgagttccgcgacaccgacgccttcatcgacgagatcccgcaggcgtac
aagcccatcgatcgcgtgatggcggatgcggcgagcctggtgcggatccggcacacgctg
cggcagctcgtcaacgtgaagggcgactga
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