Microbacterium sp. Nx66: MICNX66_1962
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Entry
MICNX66_1962 CDS
T11414
Name
(GenBank) DNA polymerase III delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
minx Microbacterium sp. Nx66
Pathway
minx03030
DNA replication
minx03430
Mismatch repair
minx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
minx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MICNX66_1962
03430 Mismatch repair
MICNX66_1962
03440 Homologous recombination
MICNX66_1962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
minx03032
]
MICNX66_1962
03400 DNA repair and recombination proteins [BR:
minx03400
]
MICNX66_1962
Enzymes [BR:
minx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MICNX66_1962
DNA replication proteins [BR:
minx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MICNX66_1962
DNA repair and recombination proteins [BR:
minx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MICNX66_1962
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
DUF8738
Motif
Other DBs
NCBI-ProteinID:
CAD5139554
LinkDB
All DBs
Position
Nx66:complement(2004639..2005676)
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AA seq
345 aa
AA seq
DB search
MAASRPPSRGGAKATKIPQVSWREPHPAPLVLVSGPEEVCAERAIAGVRDYLRAEDPALE
VSDVRADDYAPGTLLSLTSPSLFGEPRLVRVSGVEKCSDAFLHEAIGYLENPQEGATVVL
RHTGASVRGKKLLDALRAGTGGGIEIACPAIKRDGDRVDFAAGEFKAAKKRIAPPALRAL
VSAFADDLTELAAACQQLIGDVEGDITEEVVTKYYGGRVEVSAFVVADTAIAGRYGEALV
ALRHALSSGADPVPMVAAFAMKLRTMARVAGNREPSRQLAQRLGMKDWQVDRARRDLAGW
NERSLGMAIQATARADAEVKGAARDPIFALERMVTVIATREPFGG
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctcccgtcctccctcccgtggcggcgcgaaggccacgaagatcccgcaggtg
tcctggcgggagccgcatcccgcgccgctggtgctcgtctcgggcccggaggaggtctgc
gccgagcgcgcgattgccggggtgcgcgactacctccgtgccgaggacccggcactcgag
gtcagcgacgtccgtgccgacgactatgctcccggcacactgctctccctcacctcaccg
tccctgttcggtgagccgcgactggtccgcgtgtccggcgtggagaagtgctccgacgcg
ttcctccatgaggccatcgggtatttggagaacccgcaggagggcgcgaccgtcgtgctc
cggcacacgggcgcaagtgtccgcgggaagaagctcctcgacgccctccgcgcggggacc
ggcggtgggatcgagatcgcctgccccgccatcaagcgcgacggcgaccgggtcgacttc
gcggcgggggagttcaaggcggcgaagaagcgcatcgctccacctgcgctccgggcgctc
gtctcggccttcgccgacgacctcaccgagctcgcggccgcctgccagcagctgatcggc
gacgtcgagggcgacatcacggaagaggtcgtcaccaagtactacggcggccgggtcgag
gtgtcggcgttcgtcgtcgccgacacggccatcgccggccgatacggtgaggctctcgtg
gcgcttcggcatgccctgtcctccggtgcggacccggtgccgatggtcgccgcgttcgcg
atgaagctgcgcacgatggcgcgcgtcgccggcaatcgtgaacccagcaggcagctcgcc
cagcgcctcgggatgaaggactggcaggtcgaccgcgcgcgtcgcgacctggcgggctgg
aacgagcgatccctcgggatggcgatccaggccaccgcgcgcgccgacgccgaggtcaag
ggtgcggcgcgtgaccccatcttcgcgctcgagcggatggtgacggtcatcgccacccgt
gagccattcgggggataa
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