KEGG   Microbacterium sp. No. 7: AOA12_03155
Entry
AOA12_03155       CDS       T04102                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
mio  Microbacterium sp. No. 7
Brite
KEGG Orthology (KO) [BR:mio00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mio03400]
    AOA12_03155
Enzymes [BR:mio01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AOA12_03155
    5.6.2.6  RNA 3'-5' helicase
     AOA12_03155
DNA repair and recombination proteins [BR:mio03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    AOA12_03155
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH3_Lhr WH4_Lhr DEAD WH2_Lhr Helicase_C ResIII AbiEi_4 GntR FaeA
Other DBs
NCBI-ProteinID: ALJ18956
UniProt: A0A0P0DL68
LinkDB
Position
complement(693523..698445)
AA seq 1640 aa
MDDALARFGPATQDWFRGAFARPTTAQAGAWAAISEGRHALVVAPTGSGKTLSAFLWAID
RIFHDKRESSSAEEGGTQASSMPRTRVLYVSPLKALGVDVERNLRSPLVGIDQSARRLGL
RVPPVTVGVRSGDTPAADRRRLVVDPPDILITTPESLYLMLTSQAAQTLRGVHTVIVDEV
HAVAATKRGAHLAVSLERLDALLDAPAQRIGLSATVRPIDEVARFLGGAAPVEIVAPRAT
KAFDLRVVVPMPDMANPPPPPGTPADAGNTDEDADWYTTSAPATGSVWPHVEEAIVERIL
AHRSTIVFANSRRLAERLTGRLNEIYEELAGVDTPGLDTPGLDTPSLRDGTRPAGAGSTP
GGVPAGAARAGARPAGGMPAETMAQSGVSSGAPPVLAKAHHGSVSKEQRAQVEDELKSGT
LRCVVATSSLELGIDMGAVDLVIQVEAPPSAASGLQRVGRAGHQVGEVSRAALFPKHRGD
ILHTAVVTERMLAGKIEAIAIPQNPLDILAQQTVAACAVGPVDVEGWYETVCRSAPFRSL
PRSAYEATLDLLAGRYPSDEFAELRPRVVWDRDHGTLTGRPGAQRIAVTSGGTIPDRGLF
GVFVAGETTGARVGELDEEMVYESRVNDVFTLGTTSWRIVEITHDRVNVVPAFGQPGKLP
FWHGDGLGRPSELGEALGRFSREIAAEPPEKATARLRESGLNDNAIANLLAYLSEQREAT
GSLPTDRTLTVERSRDEVGDWRVILHSPYGMHVHAPWALAVNARIRERLGVEGSAVASDD
GIIARVPDADAEPPGAELFVFEPDELEQLVTDEVGGSALFASRFRECAARALLLPRLNPQ
KRAPLWQQRQRSAQLLEVARKHPTFPIILETLREVLQDVYDLPALLRVARAIGDRRIRLV
ETTTSQPSPFARDLLFGYVGAFMYEGDSPLAERRAAALSIDPALLSELLGKVELRELLDP
AVIVQFEAEAQRLAPDRRVRGVEGVADLLRLLGPLDAAEVAERLDAASAGLDARDRDTSD
LDTRDLDTPSLRDGTRSAVVLRDGTRSAGVDSSGAGARPDDGTRSAGAGAAGAASLASAL
LGELVAARRAIPVTIAGSERVAAIEDAGRLRDALGIGLPVGIPTAFLEPVADPLADLVAR
HARTHGPFRTGDVAARFGLGAAVARQALQRLESQGRLSSGYFLADAPPGSDDREWCDTEV
LRRLRLRSLAAIRGAVEPVPPDAFARFLPAWQHLDRPLEGVDGVLATIEQLAGVPLPASA
WESLILPSRVRDYAPSLLDELLATGEVVWSGHGSLPGRDGWIALHPADLASVTLVPPDEP
AETSALEQRVLDVLVGGGAFFAAQLQTLTGAESETAVVDALWNLAWTGRVTGDTFAPIRT
LLSGGSQAHRTARRTPRTRMFRGTPLAAARTTPPRAPLAGGRWSLLPAPEPDAAVRAAAT
ASLLLERYGVVTRGSVQAEGVPGGFAQVYRVLSGFEDAGHCRRGYVIERLGAAQFATSAT
IDRVREFATLPDPAPLAARTLAATDPANPYGAALAWPALEGVGHRPGRKAGALVTLVDGI
LVLYLERGGRSALAFTDDETVLAAAARSLVETARAHRLDTLTIEQVSGQFVYGTAVGRAL
HAAGFVESSRGLTLRRTSRP
NT seq 4923 nt   +upstreamnt  +downstreamnt
atggatgacgcactcgcccgcttcggccccgcgacgcaggactggttccgcggcgcgttc
gcgcggccgacgacggctcaggcgggtgcgtgggccgcgatctcggagggcaggcacgcc
ctcgtggtcgcgccgaccggctcgggcaagacgctgtcggcgttcctctgggcgatcgac
cgcatcttccacgacaagcgcgagtcctcgtccgccgaggaaggcggcacgcaggcctcg
agcatgccgcgcacgcgcgtgctgtacgtctccccgctcaaggccctgggcgtcgacgtc
gagcgcaacctgcggtctccgctcgtgggcatcgaccagtcggcccggcggctgggcctt
cgcgtgccgcccgtgacggtcggcgtgcgctcgggcgacacgcccgcggccgaccgtcgg
cggctcgtcgtcgacccgcccgacatcctcatcacgacgcccgagtccctctatctcatg
ctgacgtcgcaggcggcgcagacgttgcgcggcgtgcacaccgtgatcgtcgacgaggtg
cacgccgtcgccgcgaccaagcgcggcgcgcacctcgcggtgagcctcgagcgcctcgac
gcgctgctcgacgctccggcgcagcgcatcggcctctcggcgacggtgcgcccgatcgac
gaggtcgcgcgcttcctgggcggcgccgcgcccgtcgagatcgtcgcgccgcgcgccacg
aaggccttcgatctgcgcgtcgtcgtgccgatgcccgacatggccaatcccccgccgcct
ccgggcacgccggcggatgccgggaacaccgacgaggatgccgactggtacacgacctcg
gcgcccgcgacgggctcggtgtggccgcacgtcgaggaggcgatcgtcgagcgcatcctc
gcgcaccggtccacgatcgtgttcgccaactcccgccggctcgccgagcggctcacgggc
cggctcaatgagatctacgaagagctcgcgggtgtcgatacgccgggtctcgatacgccg
ggtctcgatacgccgtcgctgcgcgacggcactcgaccagcgggggcgggctcgacgcca
ggcggcgttccggcgggggcggcgcgcgccggcgcgcgcccggcgggcgggatgccggcc
gagacgatggcgcagtccggcgtctccagcggcgcgccgcccgtgctcgcgaaggcgcac
cacggatcggtgtcgaaggagcagcgcgcgcaggtcgaggacgagctgaagtcgggcacg
ctgcgctgcgtcgtcgcgacgagcagcctcgagctcggcatcgacatgggagccgtcgac
ctcgtcatccaggtcgaggcgccgccgtcggcggcatccggtctgcagcgcgtcgggcgc
gcggggcatcaggtgggcgaggtgagccgcgcggcgctgttccccaagcaccgcggcgac
atcctgcacacggccgtcgtgaccgagcgcatgctcgcgggaaagatcgaggcgatcgcg
attccgcagaacccgctcgacatcctcgcgcagcagacggtcgccgcgtgcgccgtcggg
ccggtcgacgtcgagggctggtatgagacggtgtgccgctcggcaccgttccgctcgctg
ccgcgctcggcctacgaggcgacgctcgatctgctcgcgggacgctacccgtccgacgag
ttcgccgagctgcgaccgcgggtcgtgtgggatcgcgatcacggcacgctcaccgggcgg
ccgggcgcgcagcgcatcgcggtcacgagcggcggcacgattcccgatcgcggcctgttc
ggcgtgttcgtcgcgggcgagacgacgggcgcgcgcgtgggcgagctcgacgaggagatg
gtctacgagtcgcgcgtgaacgacgtgttcactctcggcacaacgagctggcgcatcgtc
gagatcacgcacgaccgcgtcaacgtcgtgccggcgttcgggcagcccggcaagctgccg
ttctggcacggcgacggcctcgggcgaccgtccgagctcggcgaggcgctcggccggttc
tcacgcgagatcgccgcggagcctcccgagaaggcgacggcacgcctgcgcgagtcgggc
ctcaacgacaacgcgatcgccaacctgctcgcctacctgagcgagcagcgcgaggcgacc
ggcagcctgccgaccgaccgcaccctcacggtcgagcggtcgcgcgacgaggtcggcgac
tggcgggtgatcctgcattccccttacggcatgcacgtgcacgcgccgtgggcgctcgcg
gtgaacgcacgcatccgcgaacgcctcggcgtcgaagggtcggcggtcgcgagcgacgac
ggcatcatcgcccgcgtgcccgacgccgacgccgagccgcccggcgccgagctgttcgtg
ttcgaacccgacgagctggagcagctcgtgaccgacgaggtgggcggatcggccctgttc
gcctcacgcttccgcgagtgcgcggcccgggcgctgctactgccgcgcctgaacccgcag
aagcgcgcgccgctgtggcagcaacggcagcgctcggcgcagctgctggaggtcgcgcgc
aagcatccgacgttcccgatcatcctcgagacgctgcgcgaggtgctgcaagacgtctac
gacctgcccgcgctgctgcgcgtcgcccgcgcgatcggcgaccggcgcatccggctcgtc
gagaccacgacgagccagccgtcgccgttcgcacgcgacctgctgttcggatatgtcggt
gcgttcatgtacgagggcgactcgcccctcgccgagcgacgcgcggcggccctgtcgatc
gaccccgccctgctgtcggagctgctcggcaaggtcgagctgcgtgagctgctcgacccc
gccgtcatcgtgcagttcgaggccgaggcgcagcggctcgcccccgaccggcgcgtgcgc
ggcgtcgagggcgtcgccgacctgctgcgcctgctcggacccctggatgccgcggaggtc
gcggagcggctggacgcggcgtcggcgggtctcgatgcgcgggatcgcgatacgtctgat
ctcgatacgcgggatctcgatacaccgtcgctgcgcgacggcactcgatcagcggtggtg
ctgcgcgacggcactcgatcagcgggcgtggatagttcgggcgcgggggccaggcccgac
gacgggacgcgatcagcgggggccggagcggcaggcgctgcttcgctggcatccgcgctg
ctcggcgagctggtggcggcgcgccgggcgatccccgtgacgatcgcgggcagcgagcgg
gtcgccgcgatcgaggatgccgggcgcctgcgcgacgccctcggcatcggactgccggtc
ggcatccccacggcgttcctcgagcccgtcgccgatccactggccgacctcgtcgcccgc
catgcccgcacgcacgggcccttccgcaccggcgatgtcgccgcccggttcgggctcggc
gcagcggtcgcgcgccaggcgctgcagcgtctcgagtcgcagggccgcctgtcgagcgga
tacttcctcgccgatgccccgccgggatccgacgaccgcgaatggtgcgacaccgaggtg
ctgcgccggctgcgactgcgttccctcgcggcgatccgcggcgccgtcgagcccgtgcct
cccgacgcgttcgcacggttcctgcccgcatggcagcacctcgatcggccgctcgagggc
gtcgacggcgtgctcgccacgatcgagcagctggcgggcgtgccgctcccggcgagcgcg
tgggagtcgctcatcctgccgtcacgcgtgcgcgactacgcgccgtccctgctcgacgag
ctgctcgccacgggcgaggtcgtctggtccggccacggctcgctgcccggacgcgacggc
tggatcgccctgcatccggccgatctggcatccgtcacgctcgttccgcccgacgagccg
gccgagacgagcgcactcgagcagcgggtgctcgacgtgctcgtcggcggcggcgcgttc
ttcgcggcccagctccagacgctgaccggcgccgagagcgagaccgccgtcgtcgacgcg
ctgtggaacctcgcctggaccgggcgtgtcacgggtgacaccttcgcccccatccgcacg
ctgctgtcgggtggctcgcaggcgcatcgcacggcgcggcgcacaccgcgcacccgcatg
ttccgcggcacgccgctggccgccgcgcgcaccacgccaccgcgcgcacccctcgccggg
ggccgctggtcgctgctgccggcgcccgagcccgacgccgccgtccgagccgcggcgacc
gcgagcctgctgctggagcggtacggcgtcgtcacgcgcggctcggtgcaggccgaaggc
gtgccgggcgggttcgcgcaggtctatcgcgtgctctccggattcgaggatgccgggcac
tgccgccgcggctatgtcatcgaacgcctcggcgccgcacagttcgcgacgtcggcgacg
atcgaccgcgtgcgcgagttcgccacgctgcctgatccggcaccgctcgccgcgcgcaca
ctggccgcgacggaccccgccaacccctacggcgcggcgctcgcgtggcccgcgctcgag
ggggtcggccatcgccccggccgcaaggcgggtgcgctcgtgacgctcgtcgatggcatc
ctggtgctctacctcgagcgcggcggacgctcggccctcgccttcaccgacgacgagacc
gtgctcgccgccgcggcgcgcagcctcgtcgagacagcgcgcgcccaccgtctcgacacc
ctcacgatcgagcaggtcagcggtcagttcgtctacggcaccgccgtcggccgcgccctg
cacgccgcgggcttcgtcgagtcgtcccgcggcctcacgctccgccgcacctcccgcccc
tag

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