Microbacterium sp. No. 7: AOA12_03285
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Entry
AOA12_03285 CDS
T04102
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mio
Microbacterium sp. No. 7
Pathway
mio03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mio00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AOA12_03285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mio03021
]
AOA12_03285
03400 DNA repair and recombination proteins [BR:
mio03400
]
AOA12_03285
Enzymes [BR:
mio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AOA12_03285
Transcription machinery [BR:
mio03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AOA12_03285
DNA repair and recombination proteins [BR:
mio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AOA12_03285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
ADIP
Motif
Other DBs
NCBI-ProteinID:
ALJ18981
LinkDB
All DBs
Position
730822..734691
Genome browser
AA seq
1289 aa
AA seq
DB search
MLDATTFDELRIGLATADDIRRWSFGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWEC
ACGKYKRVRFKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDM
APKDLEKVIYFAAYMVVSVDADARHRDLATHEGNIRLEMKNLADRRDARVAARMEKYEQE
LAALEAEGAKADQKRKTEAAAEKDMAGIRKSFDEQIARLERVWEEFRTLEAGQLKQEDDV
FQELQDRFGQYFEAYMGAEGIKRRLEIFDLAAEAESLHLQISEGKGQRKIRAIKRLKVVN
SFLQTKMSPAAMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHQCGLPKDMALELFKPFVIKRLIDLGHSQNIKAAKRSVERAR
PAVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQ
MAVHLPLSVEAQAEARILMLASNNILKPSDGRPVTLPSQDMIIGLHHLTTLKEGAKGEGR
VFGSVSEAILAKDEGTLDLQAKVRIRIPGLTFLEGEAPEGYERHGLVDASLGQAIFNDTL
PKGYPFVRGQADKGKLSQIVNKLAEEYPKVEVAASLDRIKDAGFHWATRSGVTVALSDIL
TPPNKAEIVAEYEQKAAKAQSQFDRGLTTDAERRQELIQIWTEATDRVQAAMRENFPADN
TINRMVSSGARGNWLQIRNIAGMRGLVNNPKGEIIPRPIISSYREGLSVAEYFIATHGAR
KGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTGKGLEFTIAAPGADGELVKDANVE
NSVFARTLAADVVDAAGTVLAEAGDDVGDVLIDKLVEGGIQTIKVRSVLTCDSAVGVCAK
CYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGSASADDITQGLPRVQELF
EARTPKGASPIAEADGVIKIDETDKAKKVILTPDNGDEPHVYPVLKRATLLVEDGQRVTV
GQPLQVGTLDPKEVMRVQGAREVQKYLVGGVQGVYRSQGVPIHDKHIEVIVRQMLRKVTV
VDHGDTTLLPGELVDFKRYQQINREAVAEGKRPASGRPELMGITKASLATESWLSAASFQ
ETTRVLTQAAMEGKSDPLVGLKENVIIGKLIPAGTGLAKYRNVVVEATEEAKSERYPNRI
FASDGAYSDADLSFVDFDSFTTDDFSSYN
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgcaacaactttcgatgagcttcgcatcggtctcgccaccgccgacgacatc
cgtcgctggtccttcggcgaggtcaagaagcccgagaccatcaactaccgcacgctgaag
cccgagaaggacggtctcttcggcgagcagatcttcggcccgtcgcgcgactgggagtgc
gcgtgcggcaagtacaagcgcgtgcgcttcaagggcatcgtgtgcgagcgctgcggcgtc
gaggtcacgaagtcgtcggtgcgccgcgagcgcatgggccacatcgagctcgccgcgccc
gtcacgcacatctggtacttcaagggcgtgccgtcgcgcctcggctacctgctcgacatg
gcgccgaaggacctcgagaaggtcatctacttcgcggcctacatggtcgtgtcggtggat
gccgacgcgcgtcaccgcgacctcgcgacgcacgagggcaacatccgcctcgagatgaag
aacctcgccgatcgccgcgacgcccgcgtcgccgcgcgcatggagaagtacgagcaggag
ctcgcggccctcgaggccgagggcgccaaggccgaccagaagcgcaagaccgaggccgcc
gccgagaaggacatggcgggcatccgcaagagcttcgacgagcagatcgcgcgcctggag
cgcgtgtgggaggagttccgcacgctcgaggccggccagctcaagcaggaggacgacgtc
ttccaggagctgcaggaccgcttcggccagtacttcgaggcctacatgggcgccgagggc
atcaagcgccgcctggagatcttcgacctggccgctgaggccgagagcctgcacctgcag
atctcggagggcaagggccagcgcaagatccgcgcgatcaagcgcctgaaggtcgtcaac
tcgttcctgcagacgaagatgagccccgccgcgatggtgctcgacgtcgttccggtcatc
ccgccggagctgcgccccatggtgcagctcgacggcggccgcttcgccacgagcgacctc
aacgacctgtaccgccgcgtgatcaaccgcaacaaccgcctgcgccgcctcatcgacctc
ggtgcccccgagatcatcgtgaacaacgagaagcggatgctgcaggaggccgtcgatgcg
ctgttcgacaacggtcgtcgtggccgtcccgtcacgggcacgggcaaccgcgcgctcaag
tcgctcagcgacatgctcaagggcaagcagggccggttccgccagaacctgctcggcaag
cgcgtggactactcgggccgttcggtcatcatcgtgggcccgcagctcaagctgcaccag
tgcggcctgccgaaggacatggcgctcgagctgttcaagccgttcgtcatcaagcgcctg
atcgacctcggtcactcgcagaacatcaaggccgccaagcgctcggtcgagcgcgcgcgc
cccgcggtgtgggacgtgctcgaggagatcatccgcgagcgtcccgtgctgctcaaccgc
gcgcccacgctgcaccgtctcggcatccaggcgttcgagccgcagctcgtggagggcaag
gcgatccagctgcacccgctcgtgtgcgccgcgttcaacgccgacttcgacggcgaccag
atggccgtgcacctgccgctgtcggtcgaggcgcaggccgaggcccgcatcctcatgctc
gcgtcgaacaacatcctcaagccgtcggacggccgcccggtgaccctgccctcgcaggac
atgatcatcggcctgcaccacctgacgacgctcaaggagggcgcgaagggcgagggccgc
gtgttcggctcggtctccgaggcgatcctggccaaggacgagggcaccctcgacctgcag
gcgaaggtgcgcatccgcatcccgggtctcaccttcctcgagggcgaggctcccgagggc
tacgagcgtcacggtctcgtcgacgcgtcgctcggccaggcgatcttcaacgacacgctg
cccaagggctacccgttcgtgcgcggccaggccgacaagggcaagctgtcgcagatcgtc
aacaagctcgccgaggagtaccccaaggtcgaggtcgccgcgtcgctggaccgcatcaag
gatgccggcttccactgggccacgcgctcgggcgtcacggtcgcgctgagcgacatcctg
acgcccccgaacaaggccgagatcgtcgccgagtacgagcagaaggccgccaaggcgcag
tcgcagttcgaccgtggtctcacgaccgacgccgagcgccgtcaggagctcatccagatc
tggaccgaggcgaccgaccgcgtgcaggccgcgatgcgcgagaacttcccggccgacaac
acgatcaaccgcatggtctcgtcgggtgcgcgcggcaactggctgcagatccgcaacatc
gcgggcatgcgaggcctggtgaacaacccgaagggtgagatcatccctcgcccgatcatc
tcctcgtaccgcgagggcctgtcggtggcggagtacttcatcgcgacccacggcgcccgc
aagggcctggccgacacggctctgcgcacggccgactcgggctacctgacgcgtcgtctc
gtggacgtctcgcaggacgtcatcatccgcgaggaggactgcggcacgggcaagggcctc
gagttcacgatcgcggcgcccggcgccgatggtgagctcgtgaaggatgccaacgtcgag
aactcggtgttcgcgcgcaccctcgcggccgacgtggtcgacgccgccggcacggtgctc
gcggaggcgggcgacgacgtgggcgacgtgctcatcgacaagctcgtcgagggcggcatc
cagaccatcaaggtgcgctcggtgctcacctgcgactcggccgtcggcgtctgcgcgaag
tgctacggccgttcgctcgcgaccggcaagctcgtcgacatcggcgaggcggtgggcatc
atcgcggcgcagtcgatcggtgagcccggcacgcagctgacgatgcgcacgttccacacg
ggtggctcggcctcggccgacgacatcacgcagggtctgccccgcgtgcaggagctgttc
gaggcgcgcacgccgaagggcgcgtcgccgatcgcggaggccgacggcgtcatcaagatc
gacgagaccgacaaggccaagaaggtcatcctgacgcccgacaacggcgacgagccgcac
gtctaccccgtgctcaagcgcgcgacgctgctggtcgaggacggccagcgcgtcacggtg
ggccagccgctgcaggtcggaacgctcgaccccaaggaggtcatgcgcgtgcagggcgcc
cgcgaggtgcagaagtacctcgtcggcggcgtgcagggcgtgtaccgctcgcagggcgtg
ccgatccacgacaagcacatcgaggtcatcgtgcgccagatgctgcgcaaggtcaccgtg
gtcgaccacggcgacacgacgctgctgcccggcgagctggtggacttcaagcgctaccag
cagatcaaccgggaggccgtggccgagggcaagcgccccgcgtcgggccgtcccgagttg
atgggcatcacgaaggcgtcgctcgcgacggagtcgtggctgtcggccgcgtcgttccag
gagacgacccgcgtgctcacgcaggcggcgatggagggcaagagcgacccgctcgtcggc
ctcaaggagaacgtcatcatcggaaagctgatccccgctggaaccgggcttgcgaagtac
cgcaatgtcgtggtcgaggcgacggaggaggccaagagcgagcggtaccccaaccgcatc
ttcgcctcggacggcgcctacagcgacgccgacctcagcttcgtcgacttcgacagcttc
acgaccgacgacttctcgtcgtacaactag
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