KEGG   Microbacterium sp. No. 7: AOA12_08595
Entry
AOA12_08595       CDS       T04102                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
mio  Microbacterium sp. No. 7
Pathway
mio03420  Nucleotide excision repair
mio03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mio00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AOA12_08595
   03430 Mismatch repair
    AOA12_08595
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mio03400]
    AOA12_08595
Enzymes [BR:mio01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AOA12_08595
DNA repair and recombination proteins [BR:mio03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AOA12_08595
   MMR (mismatch excision repair)
    Other MMR factors
     AOA12_08595
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PDDEXK_1 UvrD_C_2 AAA_30 Viral_helicase1
Other DBs
NCBI-ProteinID: ALJ19963
UniProt: A0A0P0EAW1
LinkDB
Position
1857381..1860650
AA seq 1089 aa
MNAALTPHVLAAALGQPAPTDAQARVISSPLQPSLVIAGAGSGKTETMAGRVVWLVANGL
VRRDEVLGLTFTRKAAGELAERIHRRLRRLGEFERRGLLPALPGLHARGALDVFGEIERA
GAGERAWHDALQRLGTVDADAAPAADALLDRPVVATYNSFADQIVREHAVRAGHDPEAVV
LTESAAWLLMRRVVLDSDDPRLEELTESLSTIIDAALRIARDGVDNLVDLDALAAFPARF
AGIAELPSVSKRVTVYKEVGEAVAAVGGLAPLVELAREYAAQKRRRGLIDFSDQVAGACR
LVREHAAVRDDLRTRHRAVLLDEYQDTSVVQTELLAAAFAGGAVMAVGDPHQSIYGWRGA
SAGNLGGFAAAFAAGGGEPASAGAAGAFSLMTSWRNSVRVLDAAQAVLAPLAASAPVRVD
PLEPRPGAPAGEVEIVVERDVDAEADRVAEWFSRVRAARGRATTGAVLFRSKRHMTRFAD
ALARHGIPHRILGMGGLLSTPEVVDVVSALRVIADPQAGSALLRLLGGPRWRIGIADLRA
LAELADRLTRHDAALQPLQREHRADDASSLIDALDFVGRSAADHGWLASFTPEAVARLRD
AAGVFAGLRRQAGLPVAELVRLIESELRLDIELAANEARGPARVAGDQLRAFVDELHGFL
ASDDNTSLTSLLAWIDRAERVDEFAPRTEPPEDDVVQLLTVHGSKGLEWDAVAVVRLVED
ELPGALRETKGWLRFGVLPSEFRGDAAWLPRFAWATARTQQDLKALLDGYVEQNRAHHLD
EERRLAYVAVTRARDHLLLSSSAWSGARRPRPASRFLAEIATALGNELAEQDAGDDPYLG
ERKQLVWPLDPLGARRPVVERAAALVRAALDAPRREPGGDLALLLAERDDARAGAPPVVP
DRIPASRFKDVRADGGASFARPLPERPYRQTRVGTRFHAWIEQRSGLAGAGSSLDDALWD
DDALADDVPHDGEEAQTLDALKEAFLASEWAGLQPVEVESEIDFVLPDALGDGQDRIVIC
KLDAVYRRGDRVEIVDWKTGAAPRTAAQREARMLQLELYRTAYHAARGVPLEQIDVALFY
VAEGLVLRG
NT seq 3270 nt   +upstreamnt  +downstreamnt
gtgaacgcggcgctcactccgcacgtgctggccgcggcgctgggccagcccgcgccgacc
gatgcgcaggcgcgcgtgatctcctcgccgctgcagccgtcgctggtcatcgcgggtgcc
ggcagcggcaagaccgagacgatggcgggccgcgtcgtctggctcgtcgcgaacggcctc
gtgcgccgcgacgaggtcctggggctcacgttcacgcgcaaggcggcgggcgagctcgcc
gagcggatccatcgacggctgcgacggctcggcgagttcgagcgccgcgggctgctgccg
gcgctgcccgggctgcacgcgcgcggcgccctcgacgtgttcggcgagatcgagcgcgcc
ggagcgggcgagcgggcgtggcacgacgcgctgcagcggctcggcacggtcgacgcggat
gccgcgcccgctgccgacgcgctgctcgaccggccggtcgtcgcgacctacaacagcttc
gccgaccagatcgtgcgcgagcacgcggtgcgcgcggggcacgatcccgaggcggtcgtg
ctgaccgagtcggcggcctggctgctgatgcggcgcgtcgtgctcgacagcgacgacccg
cgcctggaggagctgaccgagagtctgagcacgatcatcgacgccgccctgcgcatcgcg
cgcgacggtgtcgacaacctcgtcgatctcgatgcgcttgcagcgtttccggcccggttc
gccggcatcgcggagctgccctcggtgagcaagcgggtgacggtgtacaaggaggtcggg
gaggccgtcgcggccgtcggcggcctcgcgccgctcgtcgagctcgcgcgcgagtacgcg
gcgcagaagcggcggcgcggcctcatcgacttctccgaccaggtcgccggcgcctgccgt
ctcgtgcgcgagcacgccgcggtgcgggacgacctgcgcacgcgtcatcgggccgtgctg
ctcgacgagtaccaggacacgtcggtcgtgcagaccgagctgctcgccgcggcgttcgcg
ggcggcgccgtcatggccgtcggcgacccgcaccagtcgatctacggctggcgcggcgcg
agcgcgggcaatctgggcggcttcgcggcggcgttcgccgccggcggcggcgagccggcg
tcagcgggtgccgccggcgccttctcgctcatgacgagctggcgcaacagcgtgcgcgtg
ctcgacgccgcgcaggccgtgctcgccccgctggccgcctcggcgccggtgcgggtcgac
ccgctcgagccccgtccgggcgcgccggcgggcgaggtcgagatcgtcgtggagcgcgac
gtcgacgcggaggccgaccgcgtggccgagtggttctcgcgggtgcgcgccgcccgcggt
cgcgcgacgacgggcgcggtgctcttccgcagcaagaggcacatgacgcggttcgccgac
gcgctggcgcgtcacggcatcccgcaccggatcctcggcatgggaggactgctcagcacc
cccgaggtcgtcgacgtggtgtcggcgctgcgcgtcatcgccgacccgcaggcgggctcc
gcgctgctccgcctgctcggggggccgcgctggcgcatcggcatcgccgatctgcgcgcc
ctcgccgagctggccgaccggctcacccggcacgacgccgcgctgcagccgctgcagcgc
gagcaccgtgccgacgacgcgagctcgctcatcgacgcgctcgacttcgtcggccgcagc
gccgcggaccacggctggctcgcgtcgttcacccccgaggcggtcgcgcgcctgcgcgac
gcggcgggcgtgttcgcgggcctgcgccgtcaggccgggctgccggtcgccgagctcgtg
cgcctcatcgagagcgagctgcggctcgacatcgagctcgccgccaacgaggcgcgcggt
cccgcgcgggtcgcgggcgaccagctgcgcgccttcgtcgacgagctgcacggcttcctg
gccagcgacgacaacacctcgctcacgagcctgctcgcctggatcgaccgcgccgagcgc
gtcgacgagttcgctccgcgcaccgagccgcccgaggacgacgtcgtgcagctgctgacc
gtccacggctcgaagggcctcgaatgggacgccgtcgcggtcgtgcggctcgtcgaggac
gagcttccgggcgcgctgcgcgagaccaagggatggctgcgcttcggcgtgctgccgtcg
gagttccgcggcgacgcggcgtggctgccgcggttcgcatgggcgaccgcccggacgcag
caggacctcaaggcgctgctcgacggctacgtggagcagaaccgcgcccatcacctcgac
gaggagcgccgcctcgcgtacgtcgcggtcacccgggcgcgcgaccacctgctgctgtcg
tcgtcggcgtggtcgggggcgcgccggccccggccagcgagccgcttcctcgccgagatc
gcgaccgcgctgggcaacgagctcgcggagcaggatgccggcgacgacccgtacctcggc
gagcggaagcagctggtctggccgctcgatccgctcggcgcgcggcgtcccgtcgtcgaa
cgggcggcggcgctcgtccgcgccgcgctcgacgcgccgcgtcgcgagcccggcggggac
ctcgcgctgctgctcgccgagcgcgacgacgcgcgggcgggcgccccgccggtcgtgccc
gaccgcatcccggcatcgcgcttcaaagacgtgcgcgccgacggcggcgcctcgttcgcg
cggccgcttcccgagcgcccctaccggcagacgcgcgtgggcacgcggttccacgcgtgg
atcgagcagaggtcgggcctcgccggcgcgggctcctcgctcgacgacgcgctctgggac
gacgacgctctcgccgacgacgtcccgcacgacggcgaggaggcgcagacgctcgacgcg
ctgaaggaggccttcctggcgtcggagtgggcggggctgcagccggtcgaggtcgagtcg
gagatcgacttcgtcctgcccgacgcgctcggcgacgggcaggaccgcatcgtcatctgc
aagctcgacgcggtctaccgtcgcggcgaccgcgtggagatcgtcgattggaagaccggc
gcggccccccgcacggcggcgcagcgggaggcgcgcatgctgcagctggagctgtaccgc
acggcgtaccacgccgcgcgcggcgtgccgctggagcagatcgacgtcgccctcttctat
gtcgccgagggcctcgtcctgcgcggctga

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