Microbacterium sp. No. 7: AOA12_08595
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Entry
AOA12_08595 CDS
T04102
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mio
Microbacterium sp. No. 7
Pathway
mio03420
Nucleotide excision repair
mio03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AOA12_08595
03430 Mismatch repair
AOA12_08595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mio03400
]
AOA12_08595
Enzymes [BR:
mio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AOA12_08595
DNA repair and recombination proteins [BR:
mio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AOA12_08595
MMR (mismatch excision repair)
Other MMR factors
AOA12_08595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ALJ19963
UniProt:
A0A0P0EAW1
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All DBs
Position
1857381..1860650
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AA seq
1089 aa
AA seq
DB search
MNAALTPHVLAAALGQPAPTDAQARVISSPLQPSLVIAGAGSGKTETMAGRVVWLVANGL
VRRDEVLGLTFTRKAAGELAERIHRRLRRLGEFERRGLLPALPGLHARGALDVFGEIERA
GAGERAWHDALQRLGTVDADAAPAADALLDRPVVATYNSFADQIVREHAVRAGHDPEAVV
LTESAAWLLMRRVVLDSDDPRLEELTESLSTIIDAALRIARDGVDNLVDLDALAAFPARF
AGIAELPSVSKRVTVYKEVGEAVAAVGGLAPLVELAREYAAQKRRRGLIDFSDQVAGACR
LVREHAAVRDDLRTRHRAVLLDEYQDTSVVQTELLAAAFAGGAVMAVGDPHQSIYGWRGA
SAGNLGGFAAAFAAGGGEPASAGAAGAFSLMTSWRNSVRVLDAAQAVLAPLAASAPVRVD
PLEPRPGAPAGEVEIVVERDVDAEADRVAEWFSRVRAARGRATTGAVLFRSKRHMTRFAD
ALARHGIPHRILGMGGLLSTPEVVDVVSALRVIADPQAGSALLRLLGGPRWRIGIADLRA
LAELADRLTRHDAALQPLQREHRADDASSLIDALDFVGRSAADHGWLASFTPEAVARLRD
AAGVFAGLRRQAGLPVAELVRLIESELRLDIELAANEARGPARVAGDQLRAFVDELHGFL
ASDDNTSLTSLLAWIDRAERVDEFAPRTEPPEDDVVQLLTVHGSKGLEWDAVAVVRLVED
ELPGALRETKGWLRFGVLPSEFRGDAAWLPRFAWATARTQQDLKALLDGYVEQNRAHHLD
EERRLAYVAVTRARDHLLLSSSAWSGARRPRPASRFLAEIATALGNELAEQDAGDDPYLG
ERKQLVWPLDPLGARRPVVERAAALVRAALDAPRREPGGDLALLLAERDDARAGAPPVVP
DRIPASRFKDVRADGGASFARPLPERPYRQTRVGTRFHAWIEQRSGLAGAGSSLDDALWD
DDALADDVPHDGEEAQTLDALKEAFLASEWAGLQPVEVESEIDFVLPDALGDGQDRIVIC
KLDAVYRRGDRVEIVDWKTGAAPRTAAQREARMLQLELYRTAYHAARGVPLEQIDVALFY
VAEGLVLRG
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcggcgctcactccgcacgtgctggccgcggcgctgggccagcccgcgccgacc
gatgcgcaggcgcgcgtgatctcctcgccgctgcagccgtcgctggtcatcgcgggtgcc
ggcagcggcaagaccgagacgatggcgggccgcgtcgtctggctcgtcgcgaacggcctc
gtgcgccgcgacgaggtcctggggctcacgttcacgcgcaaggcggcgggcgagctcgcc
gagcggatccatcgacggctgcgacggctcggcgagttcgagcgccgcgggctgctgccg
gcgctgcccgggctgcacgcgcgcggcgccctcgacgtgttcggcgagatcgagcgcgcc
ggagcgggcgagcgggcgtggcacgacgcgctgcagcggctcggcacggtcgacgcggat
gccgcgcccgctgccgacgcgctgctcgaccggccggtcgtcgcgacctacaacagcttc
gccgaccagatcgtgcgcgagcacgcggtgcgcgcggggcacgatcccgaggcggtcgtg
ctgaccgagtcggcggcctggctgctgatgcggcgcgtcgtgctcgacagcgacgacccg
cgcctggaggagctgaccgagagtctgagcacgatcatcgacgccgccctgcgcatcgcg
cgcgacggtgtcgacaacctcgtcgatctcgatgcgcttgcagcgtttccggcccggttc
gccggcatcgcggagctgccctcggtgagcaagcgggtgacggtgtacaaggaggtcggg
gaggccgtcgcggccgtcggcggcctcgcgccgctcgtcgagctcgcgcgcgagtacgcg
gcgcagaagcggcggcgcggcctcatcgacttctccgaccaggtcgccggcgcctgccgt
ctcgtgcgcgagcacgccgcggtgcgggacgacctgcgcacgcgtcatcgggccgtgctg
ctcgacgagtaccaggacacgtcggtcgtgcagaccgagctgctcgccgcggcgttcgcg
ggcggcgccgtcatggccgtcggcgacccgcaccagtcgatctacggctggcgcggcgcg
agcgcgggcaatctgggcggcttcgcggcggcgttcgccgccggcggcggcgagccggcg
tcagcgggtgccgccggcgccttctcgctcatgacgagctggcgcaacagcgtgcgcgtg
ctcgacgccgcgcaggccgtgctcgccccgctggccgcctcggcgccggtgcgggtcgac
ccgctcgagccccgtccgggcgcgccggcgggcgaggtcgagatcgtcgtggagcgcgac
gtcgacgcggaggccgaccgcgtggccgagtggttctcgcgggtgcgcgccgcccgcggt
cgcgcgacgacgggcgcggtgctcttccgcagcaagaggcacatgacgcggttcgccgac
gcgctggcgcgtcacggcatcccgcaccggatcctcggcatgggaggactgctcagcacc
cccgaggtcgtcgacgtggtgtcggcgctgcgcgtcatcgccgacccgcaggcgggctcc
gcgctgctccgcctgctcggggggccgcgctggcgcatcggcatcgccgatctgcgcgcc
ctcgccgagctggccgaccggctcacccggcacgacgccgcgctgcagccgctgcagcgc
gagcaccgtgccgacgacgcgagctcgctcatcgacgcgctcgacttcgtcggccgcagc
gccgcggaccacggctggctcgcgtcgttcacccccgaggcggtcgcgcgcctgcgcgac
gcggcgggcgtgttcgcgggcctgcgccgtcaggccgggctgccggtcgccgagctcgtg
cgcctcatcgagagcgagctgcggctcgacatcgagctcgccgccaacgaggcgcgcggt
cccgcgcgggtcgcgggcgaccagctgcgcgccttcgtcgacgagctgcacggcttcctg
gccagcgacgacaacacctcgctcacgagcctgctcgcctggatcgaccgcgccgagcgc
gtcgacgagttcgctccgcgcaccgagccgcccgaggacgacgtcgtgcagctgctgacc
gtccacggctcgaagggcctcgaatgggacgccgtcgcggtcgtgcggctcgtcgaggac
gagcttccgggcgcgctgcgcgagaccaagggatggctgcgcttcggcgtgctgccgtcg
gagttccgcggcgacgcggcgtggctgccgcggttcgcatgggcgaccgcccggacgcag
caggacctcaaggcgctgctcgacggctacgtggagcagaaccgcgcccatcacctcgac
gaggagcgccgcctcgcgtacgtcgcggtcacccgggcgcgcgaccacctgctgctgtcg
tcgtcggcgtggtcgggggcgcgccggccccggccagcgagccgcttcctcgccgagatc
gcgaccgcgctgggcaacgagctcgcggagcaggatgccggcgacgacccgtacctcggc
gagcggaagcagctggtctggccgctcgatccgctcggcgcgcggcgtcccgtcgtcgaa
cgggcggcggcgctcgtccgcgccgcgctcgacgcgccgcgtcgcgagcccggcggggac
ctcgcgctgctgctcgccgagcgcgacgacgcgcgggcgggcgccccgccggtcgtgccc
gaccgcatcccggcatcgcgcttcaaagacgtgcgcgccgacggcggcgcctcgttcgcg
cggccgcttcccgagcgcccctaccggcagacgcgcgtgggcacgcggttccacgcgtgg
atcgagcagaggtcgggcctcgccggcgcgggctcctcgctcgacgacgcgctctgggac
gacgacgctctcgccgacgacgtcccgcacgacggcgaggaggcgcagacgctcgacgcg
ctgaaggaggccttcctggcgtcggagtgggcggggctgcagccggtcgaggtcgagtcg
gagatcgacttcgtcctgcccgacgcgctcggcgacgggcaggaccgcatcgtcatctgc
aagctcgacgcggtctaccgtcgcggcgaccgcgtggagatcgtcgattggaagaccggc
gcggccccccgcacggcggcgcagcgggaggcgcgcatgctgcagctggagctgtaccgc
acggcgtaccacgccgcgcgcggcgtgccgctggagcagatcgacgtcgccctcttctat
gtcgccgagggcctcgtcctgcgcggctga
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