Microbacterium sp. No. 7: AOA12_14605
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Entry
AOA12_14605 CDS
T04102
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mio
Microbacterium sp. No. 7
Pathway
mio03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mio00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AOA12_14605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mio03019
]
AOA12_14605
03016 Transfer RNA biogenesis [BR:
mio03016
]
AOA12_14605
Enzymes [BR:
mio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AOA12_14605
Messenger RNA biogenesis [BR:
mio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AOA12_14605
Transfer RNA biogenesis [BR:
mio03016
]
Prokaryotic type
tRNA degradation factors
AOA12_14605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
KH_1
KH-I_KHDC4-BBP
KH_KhpA-B
KH_PNO1_2nd
RNase_PH_C
KH_2
KH_NusA_1st
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
ALJ21064
LinkDB
All DBs
Position
complement(3081749..3084013)
Genome browser
AA seq
754 aa
AA seq
DB search
MEGPEITAAEAVLDNGRFGTRTVRFETGRLAQQAQGAVAAYLDEETMLLSATSASKNPRE
GFDFFPLTVDVEERSYAAGKIPGSFFRREGRPSTEAILVCRLIDRPLRPSFVDGLRNEVQ
IVITVLSIAPGEFYDALAINAASASTQISGLPFSGPIAGVRLALIPGQGEHADQWVAFPN
TTVLEDAVFDLVVAGRVLDDGDVAIMMVEAEATEHSWNLIKGGATKPSEEVVAQGLEAAK
PFIKQLVAAQNVLANAAAKEIQPYPVFLPYTQETYDFVAGRAYDELVGVYRIADKIERQN
ADDAVKDRVKGELAAAVEAGELPESALGEFSAAYKSVTKLIVRGRILTEGVRIDGRGLAD
IRALDAEVQVIPRVHGSAIFQRGETQILGVTTLNMLKMEQQIDSLSPVTSKRYLHHYNFP
PYSTGETGRVGSPKRREIGHGFLAERALVPVLPGREEFPYAIRQVSEALGSNGSTSMGSV
CASTLSLLNAGVPLRAPVAGIAMGLVSDQVDGQTRYAALTDILGAEDALGDMDFKVAGTS
EFVTAIQLDTKLDGIPSSVLSAALTQARDARLRILEVLNAAIDTPDEMAPTAPRVISVQI
PVDKIGELIGPKGKTINAIQDATGADISIEEDGTVYIGATDGPSAEAARAQVNAIANPTN
PEVGEQFLGTVVKIATFGAFISLLPGKDGLLHVSEVRKLAGGKRVENVDDVLSVGQKILV
KITKIDDRGKLSLEPVLDDAPAEDAAEEAVVVEV
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
ttggaaggtcctgaaatcaccgccgccgaagccgtcctcgacaacggacgcttcggcacc
cgcaccgtccggttcgagaccggacgcctcgcccagcaggcgcagggcgccgtggccgcc
tacctcgacgaggagacgatgctcctctcggccaccagcgcctcgaagaaccctcgcgag
ggcttcgacttcttcccgctgaccgtcgacgtcgaggagcgctcctacgctgccggcaag
atccccggctcgttcttccgccgcgagggccgcccctcgaccgaggcgatcctcgtgtgc
cgcctcatcgaccgcccgctgcgcccgtcgttcgtcgacggcctgcgcaacgaggtgcag
atcgtcatcaccgtgctgtcgatcgccccgggcgagttctacgacgcgctcgcgatcaac
gcggcatccgcgtcgacgcagatctcgggtctgccgttctcgggccccatcgccggtgtg
cgcctcgcgctcatccccggccagggcgagcacgccgaccagtgggtcgcgttcccgaac
accacggtgctcgaggatgccgtgttcgacctcgtcgtcgccggccgcgtgctcgacgac
ggcgacgtcgcgatcatgatggtcgaggccgaggccaccgagcacagctggaacctcatc
aagggcggcgccacgaagccgagcgaagaggtcgtcgcgcagggcctcgaggccgcgaag
cccttcatcaagcagctcgtcgcggcgcagaacgtgctcgcgaacgcggcggccaaggag
atccagccctaccccgtcttcctgccctacacccaggagacctacgacttcgtcgccggc
cgcgcctacgacgagctcgtcggcgtctaccggatcgccgacaagatcgagcgccagaac
gccgacgacgccgtcaaggaccgcgtcaagggcgagctggcggccgccgtcgaggcgggc
gagctgcccgagtcggcgctcggcgagttctcggccgcctacaagtcggtcacgaagctc
atcgtgcgcggccgcatcctcaccgagggcgtgcgcatcgacggtcgcggcctggccgac
atccgcgcgctcgacgccgaggtgcaggtcatcccgcgcgtgcacggctccgcgatcttc
cagcgcggcgagacgcagatcctgggcgtcacgacgctgaacatgctcaagatggagcag
cagatcgactcgctgtcgcccgtgacgagcaagcgctacctgcaccactacaacttcccg
ccctactcgacgggtgagacgggtcgcgtgggcagccccaagcgccgcgagatcggccac
ggcttcctcgccgagcgcgctctcgtgcccgtgctgccgggccgtgaggagttcccctac
gcgatccgccaggtgtccgaggcgctcggctcgaacggatcgacctcgatgggctcggtg
tgcgcctcgacgctgtcgctgctcaacgcgggcgtgccgctgcgcgcccccgtcgcgggc
atcgcgatgggcctcgtctccgaccaggtcgacggccagacccgctatgcggcgctcacc
gacatcctcggcgccgaggacgccctcggcgacatggacttcaaggtcgccggcacgagc
gagttcgtcaccgccatccagctcgacacgaagctcgacggcatcccctcgtcggtgctg
tcggcggcgctcacgcaggcgcgcgacgcgcgtctgcgcatcctcgaggtgctgaacgcg
gcgatcgacacgcccgacgagatggcgccgaccgcgccgcgcgtgatcagcgtgcagatc
ccggtcgacaagatcggcgagctgatcggccccaagggcaagacgatcaacgcgatccag
gatgccacgggcgccgacatctcgatcgaggaggacggcaccgtctacatcggcgcgacc
gacggcccctcggccgaggcggcccgcgcacaggtcaacgcgatcgccaacccgaccaac
cccgaggtcggcgagcagttcctcggcacggtcgtgaagatcgccacgttcggcgcgttc
atctcgctgctgccgggcaaggacggcctgctgcacgtcagcgaggtgcgcaagctcgcc
ggcggcaagcgcgtcgagaacgtcgacgacgtgctctcggtcggtcagaagatcctcgtc
aagatcaccaagatcgacgaccgcggcaagctgtcgctcgagcccgtgctcgacgacgcg
cccgccgaggacgctgccgaagaggccgtcgtcgtcgaggtctga
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