KEGG   Microbacterium sp. PAMC 28756: AXH82_05780
Entry
AXH82_05780       CDS       T04312                                 
Name
(GenBank) integration host factor
  KO
K03530  DNA-binding protein HU-beta
Organism
mip  Microbacterium sp. PAMC 28756
Brite
KEGG Orthology (KO) [BR:mip00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mip03032]
    AXH82_05780
   03036 Chromosome and associated proteins [BR:mip03036]
    AXH82_05780
   03400 DNA repair and recombination proteins [BR:mip03400]
    AXH82_05780
DNA replication proteins [BR:mip03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    AXH82_05780
Chromosome and associated proteins [BR:mip03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    AXH82_05780
DNA repair and recombination proteins [BR:mip03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      AXH82_05780
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_2 HTH_26 DUF937
Other DBs
NCBI-ProteinID: AMG82942
LinkDB
Position
complement(1190156..1190443)
AA seq 95 aa
MADKSITKTELVASIASATGQSQATVSGVLDSLFATVSDAVAKGSKVSIPGWISFEQVDT
AARTGRNPQTGAEIKIPAGKRVKVTAGSKLKAAVK
NT seq 288 nt   +upstreamnt  +downstreamnt
atggctgacaagtccatcaccaagaccgagctcgtcgcgagcatcgcttccgccaccggc
cagagccaggccaccgtctccggtgtcctcgactcgctgttcgccacggtctccgacgct
gtcgccaagggcagcaaggtctccatcccgggctggatctcgttcgagcaggtcgacacg
gccgcccgcacgggccgcaacccgcagacgggcgccgagatcaagatcccggccggcaag
cgcgtcaaggtgaccgccggttccaagctcaaggctgccgtcaagtaa

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