Microbacterium sp. PAMC 28756: AXH82_09290
Help
Entry
AXH82_09290 CDS
T04312
Name
(GenBank) hypothetical protein
KO
K21449
trimeric autotransporter adhesin
Organism
mip
Microbacterium sp. PAMC 28756
Brite
KEGG Orthology (KO) [BR:
mip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mip02000
]
AXH82_09290
Transporters [BR:
mip02000
]
Other transporters
Pores ion channels [TC:
1
]
AXH82_09290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
PKD
Laminin_G_3
K319L-like_PKD
Laminin_G_2
Laminin_G_1
Bact_surface_Ig-like
InlK_D3
Rax2
Big_13
TS_C
Motif
Other DBs
NCBI-ProteinID:
AMG83553
LinkDB
All DBs
Position
1949721..1955096
Genome browser
AA seq
1791 aa
AA seq
DB search
MGVVAVVVTALLGATITAPAAQADTVPTDPALPATVSADPLPTTQINGIVWAQAVGGTKV
YAGGQFTSARPAGAPAGTNETPRSNLLAYDLATGVLDTSFAPQVNGRILAAAVSPDGSRL
YIGGGFTAVNGQNRYRLAAFDTATGQLIGNWTPGTNTIVQGIVATDTTVYVTGEFSNINN
TARTGVAAVSASTGAVLDFNPVLAGGYGVRSVVVSPDASKVVIAGSFTSTNGSTNPGRGM
AALDASSGASLPWAINSVIRNAGTGASIYSLASDGDSVYGSGYDFGGSKTEDDFEGAFRA
RWSDGSMVWMEDCHGDTYSVYPTGGVLYTAAHSHYCGNIGEFPQLDPWSFNFSLAFDKNP
SDRTITPDIYGYRSFTGNPAARLLHWYPTWQPGTVSGMNQAAWSVTGGGDYLVYGGEFTA
VSGSAQQGLVRFAKPGTAPNKIGPTIKGGAYQISAQSFRAGQARVAWSANYDADNARLTY
EVFRRDLAQPIHTTTADSTYWVRPRLTYSDTAVTAGQTYEYRVKVTDPNGNTTTSDWTPV
TIAAAGTSNTYNEAVLSSSPRYYWPMNEASGSSATDWISGNDLTLSGGTTRGQAGQVVGE
TSASTAFNGTDGTSASSVSEVGPDEFSIEAWFQTTSTSGGKIVGFGNNAKGLSGSYDRHL
YLSNSGQVTFGVYPGTARTLTSGAGLNDGKWHHVVGTMNSSGMVLYVDGVRVSSRSDTTT
GQSYSGYWRIGGDSQSGWPSAGSSNYLNARIADVAVYGSALTRDAVDAHWVASGRTSSLP
AAPADAYGKAVYDLDPTLYWRLGETSGTVAKDSGRDGSTGTYQTSGSATIQRGQTGALSG
VADQAIRFTSSKLFSSWNNRQTVVSARQYPSPNTYSIETWFKTTSTGGGKLIGFGNSNSN
NANPSSNYDRHIYMNGSGQLKFGVYNGGSYVLTAPGTYRDGQWHHVVAQQSAAGMQLFVD
GVEVASNAQAGADNYNGYWRVGGDTTWEGDPFWVGTIDEAAVYSAPLTVSQVLQHYQLGD
TGELNQLPTAQFTAATSDRSVAFDASASSDPEGPIAGYAWDFGDGHTGTGVAPTHEYDTA
GTYTVTLTVTDAGGLASTVAHDVTTRNPNVPPTAAFTEKVEFLSVAVDASASADTDGTIT
AYAWNFGDGASATGATATHDYAASGTYTVSLTVTDDRGASSTETKTIAVEAQNVPPKAVA
NVVRAADGMSISADGSGSTDTDGSIVSHAWDFGDSTTATGATATHTYTTAGTYTVTLTVT
DDDGATHQATASVAVAPAATEEVIARDAFERTASSSWGSADVGGAWTVSGGAAAFSAGDG
VGRISLSPAATREARLAGVSSTSTITSLTIASSNATNGGAFNLTVNGRQVGNDVYSGRVK
IEASGAIRLYLLRNETAIGNSVVIPGTYVAGEKLSAVLTVRGTSPTTLALKVWRTGTTEP
ANPQLQGTDSTAALQTAGAVGVKMAISSVSSVSSVFSVDDYKVVTGAVVAAPNQIPTASF
VSSTSALSAAVDAGGSSDADGTIASYAWTFGDGGTATGVTASHTYAASGTYDVTLTVTDD
DGGTHSVTKPVTVTAPVTPPDPTGPTPLATDEFDRATTGGWGSADLGGAWTLSGGNAAFS
TAGGKGVVSLAPSQTREARLAVTGTSTVLDALFSSDVASTGGTASITLLGRTVGASTYSA
RVRLEPAGVIRLYLLRNETAIGNSYVLPGSYAPGQVLHARLAVSGTAPTSLAAKVWVEGQ
TEPADWQLTGTDAVAAMQVAGGIGIKTSVSSASTNTTTRLSFERFAVVVPQ
NT seq
5376 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcgtcgccgtcgtggtgaccgcgctcctcggcgcgaccatcaccgcaccggcc
gcgcaggcggatacagtgccgaccgatcccgctctgccggcgacggtgagcgctgacccg
ctgccgacgacgcagatcaacggcatcgtctgggctcaggcggtgggcggcaccaaggtg
tacgcgggcgggcagttcacgagcgcgcgcccggcgggagcgccggccggcaccaacgag
acgccgcgatccaacctcctcgcctacgatctcgcaaccggtgtgctcgacacatccttc
gccccccaggtcaacggccgcatcctcgccgcggcggtgtcgcccgacggctcgcggctg
tacatcggcggcggcttcaccgccgtcaacggtcagaaccgctaccgtctggcggccttc
gacacggccaccggccagctgatcggcaattggacccccggtaccaacacgatcgtgcag
ggcatcgtcgccaccgatacgaccgtgtacgtcacgggggagttctcgaacatcaacaac
accgcccgtaccggcgtcgcggccgtgagcgcgtcgaccggtgccgtgctcgacttcaac
ccggtcctcgccggcgggtacggcgtccgctccgtcgtggtgtcccccgatgcctcgaag
gtggtcatcgccggctcgttcacgtccaccaacgggtcgaccaacccgggtcgcggcatg
gccgcgctcgacgcctccagcggagccagcctcccctgggcgatcaacagtgtcatccgc
aacgccggcaccggcgcctccatctattcgctcgcctccgacggggacagcgtctacggc
agtgggtacgacttcggaggatcgaagacggaggacgacttcgaaggcgcgttccgcgcg
cgctggagcgacggctcgatggtgtggatggaggattgccacggcgacacctattcggtg
tacccgaccgggggtgtgctctacacggcggcgcactcgcattactgcggcaacatcgga
gagttcccgcagctcgacccgtggagcttcaacttctcgctcgcgttcgacaagaacccg
tcggaccgcaccatcactcctgacatctacgggtaccgcagcttcaccggcaacccggcg
gcccgtctgctgcactggtacccgacgtggcagcccggcacggtgtccggcatgaatcag
gccgcatggtcggtcacgggcggtggcgactacctcgtctacggcggtgagttcacggcc
gtgagcggtagcgcacaacagggactcgtgcgcttcgcgaagcccgggacggcgccgaac
aagatcggtccgaccatcaagggcggcgcctaccagatcagcgctcagtctttccgcgcg
gggcaggcacgcgtcgcctggtccgcgaactacgacgccgacaacgcccgcttgacctac
gaggtcttccgtcgtgacctcgcgcagccgatccacacgaccactgccgactccacctac
tgggtgcgaccgcggctcacgtactccgacacggcggtgaccgccggccagacatacgag
taccgggtcaaggtgaccgaccccaacgggaacaccacgacgtccgactggacgccggtg
acgatcgcggccgccgggacctcgaacacgtacaacgaagccgtgctctcgtcctcgccg
aggtattactggcccatgaacgaggcgtccggttcgtccgcgaccgactggatctccggg
aacgacctcacgctgtccggagggacgacccgtggccaggcgggccaggtcgtcggtgag
acctcggcctccacggccttcaacggcaccgacggcacctctgccagttcggtctccgag
gtcggtcctgacgagttctcgatcgaggcatggttccagacgaccagcacgagcggcggg
aagatcgtcggcttcggcaacaacgccaaggggctgtccggaagctacgaccggcacctc
tacctgagcaattcggggcaggtcacgttcggcgtgtaccccgggactgcgcggacgctc
accagcggggccggtctcaacgacggcaagtggcaccacgtggtcggcacgatgaacagc
tcgggcatggtgctgtacgtcgacggcgtgcgggtgagctcgcgctccgacacgacgacc
ggtcagagctattcaggctactggcgcatcggcggggactcccagagcggctggccgtcc
gcggggtcgtcgaactacctcaacgcccgcatcgcggacgtggccgtgtacggcagtgcg
ttgacccgtgacgcggtggatgcgcactgggtggcttctgggcgcacgtcgtcgctcccc
gctgcgcccgcagacgcctacggcaaagccgtgtacgacctcgacccgacactgtactgg
cgcctcggcgagaccagcgggacggtcgcgaaagactcgggccgcgacggaagcaccggg
acgtaccagaccagtgggtcggccacgatccaacgaggccagaccggagcgctgtccggc
gtcgcggaccaggccatccggttcacgtcctcgaagctgttctccagctggaacaaccgc
cagacggtggtgagcgcgcggcagtacccgtcgccgaacacctattcgatcgagacctgg
ttcaagaccacctcgacgggcggcggcaagctgatcggcttcgggaacagcaactccaac
aatgccaatcccagttcgaactacgaccggcacatctacatgaacggatcgggacagctg
aagttcggcgtctacaacggggggtcatacgtcctcacggcgccgggcacctaccgtgac
gggcagtggcaccatgtcgtcgcgcagcagtcggcggcagggatgcagttgttcgtggat
ggcgtggaggtcgcttcgaacgcgcaagcgggtgccgacaactacaacggctactggcgc
gtgggcggcgacaccacctgggaaggggatcccttctgggtcggcacgatcgatgaggcg
gcggtctactcagcgcccctgacggtcagccaggtgttgcagcactatcagctcggcgac
accggggagctgaaccagctgccgacggcgcagttcaccgcggcgacctcggaccggtcg
gtggctttcgacgcctccgcctcgagcgaccctgagggtccgatcgccggctatgcgtgg
gacttcggcgacggccacaccggaaccggtgtcgcgcctacgcacgagtacgacacggcc
ggcacctacacggtcaccctcacggtgaccgatgccggcgggctcgcgtccaccgtcgct
catgacgtgacgacgcggaacccgaacgtgcctcccaccgccgcgttcaccgagaaggtg
gaattcctctccgtggcggtcgacgcatccgcgagcgcggatacggacggcacgatcacg
gcgtacgcgtggaatttcggcgacggtgcctcggcgacaggggccacggcgacgcatgac
tatgcggcttccggaacctacacggtgtcgctcaccgtgaccgatgaccgcggtgcctca
tcgaccgagacgaagacgatcgctgtcgaagctcagaacgtgccgcccaaggctgtggcc
aacgtggtgcgcgccgcggatggtatgtcgatctccgccgacggaagcggctccaccgac
accgacggcagcatcgtgtcgcacgcgtgggatttcggtgacagcaccaccgcgacggga
gcgacggcgacgcacacctacacgacagcgggaacctacacggtcacgctgacggtcacg
gacgacgacggcgcaacgcatcaggcgaccgcatccgtcgccgtcgcgccggcggccacg
gaagaggtcatcgcccgagacgcgttcgagcgcacggcgtcgtcctcgtggggctccgcc
gacgtcggcggcgcctggacggtgtccggaggggcggcggcgttctcggcgggggatggc
gtgggacggatctccctgtctcctgccgccacgcgagaggctcgcctcgccggggtctcg
agcacgtcgacgattacctcgttgaccatcgcctcgagcaacgcgaccaacggcggagcc
ttcaacctcacggtgaacggtcgtcaggtcggcaacgacgtctactcgggacgcgtgaag
atcgaggcgagtggcgcgatccgtctctacctgctgcgcaacgagacggcgatcggcaac
agcgtcgtgatccccggtacgtacgtggcgggcgagaagttgtcggctgtgctcacggta
cgcggaacgtcgccgaccacgctcgcgctgaaggtctggcgaacggggacgacggagccg
gcgaacccgcagctgcaggggacggactccactgccgctctgcagacagcgggtgcggtc
ggcgtgaagatggcgatcagctcggtctcctccgtctcctcggtcttctcggtggacgac
tacaaggtcgtcaccggggccgtggtcgctgcgcccaaccagatcccgacagcatccttc
gtctcctcgacctccgcactcagtgcagctgtcgacgctggcggatcgagcgacgcggat
gggacgatcgcgtcctacgcgtggacgttcggggatggcggtaccgcgacgggagtcacg
gcatcgcacacgtatgcggcatcggggacgtacgacgtcaccctgacggtgaccgacgac
gacggcggaacgcactcagtcacgaagccggtcactgtgaccgcgccggtcacgccgccg
gaccccacagggccgactcccctcgcgacggatgagttcgaccgggcgacgacgggaggc
tggggcagcgccgacctcggtggcgcgtggacgctgtcgggaggaaacgccgcattcagc
acggcaggcggaaagggcgtcgtgtccctcgcgccgtcgcagacgcgggaggcgcgactg
gcggtgaccggtacgagcacggtgctcgatgccctcttctcgtcggatgtcgcctcgacc
ggcggcaccgcgagcatcacgctgctcggccggaccgttggggcatcgacatactcggcg
cgcgtgcgactggagcccgccggcgtcatccggctgtacctcctccggaatgagacggcg
atcgggaacagctacgttctgccgggctcctatgcgcccggacaggtgctccacgcccgc
ctcgcggtcagtggtaccgccccgaccagcctggcggccaaggtctgggtcgaggggcag
accgagcctgcggattggcagctcacgggcacggacgcggtggcggcgatgcaggtcgcc
ggtggcatcgggataaagacgtctgtcagctcggcctcgacgaacaccaccacgcggctc
tccttcgagcggttcgccgtggtcgtcccgcagtag
DBGET
integrated database retrieval system
