Microbacterium sp. PAMC 28756: AXH82_10450
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Entry
AXH82_10450 CDS
T04312
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mip
Microbacterium sp. PAMC 28756
Brite
KEGG Orthology (KO) [BR:
mip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mip03016
]
AXH82_10450
Enzymes [BR:
mip01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AXH82_10450
Transfer RNA biogenesis [BR:
mip03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AXH82_10450
Prokaryotic type
AXH82_10450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AMG83755
LinkDB
All DBs
Position
2193398..2194246
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AA seq
282 aa
AA seq
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MRIRLDIAYDGTHFRGWATQPTLRTVQGTLEAALARIVGSDVRFVVAGRTDAGVHASGQV
AHVDLDEAQWARIQARHGRAAEDPAGSIAARMRGVLGAYPDVTVVRSSLAPEGFDARFSA
VWRRYRYRLADDLAGYDPLRRLDTTTIRGRLDAEAMDAAARTLIGLHDFAAYCKPREEAT
TIRTLLDYRWQRDADGVLVAEVKADAFCHSMVRALVGACAAVGEGRLDVGDLVVLRDALT
RTSEFKVLAARGLTLTEVGYPADDLLAARAAQTRARRDHETD
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcatccggctcgacatcgcctacgacggcacccatttccgcgggtgggccacgcag
cccacgctccgcacggtccaggggacgctggaggcggcgctcgcccggatcgtcggctcc
gacgtgcggttcgtcgtcgccggacggacggacgccggcgtgcatgcgagcggacaggtc
gcgcacgtggatctcgacgaggcgcagtgggcccggatccaggcacgacacggccgcgcc
gccgaggatcccgcgggcagcatcgcggcgcgcatgcgcggggtgctcggcgcctacccc
gacgtgacggtcgttcgctcctccctcgcccccgagggcttcgacgcgcgcttctccgcg
gtctggcgacgctatcggtaccggctcgccgacgacctcgccggctatgacccgctacgg
cgtctcgacaccacgacgatccgcggtcggctggacgccgaggccatggacgccgccgcc
cggaccctcatcggtctgcacgacttcgccgcctactgcaagccgcgcgaggaggccacg
accatccgcacgctgctcgactaccggtggcagcgggacgcggacggggtgctcgtcgcg
gaggtgaaggccgacgcgttctgccacagcatggtgcgggccctcgtcggcgcctgcgcg
gcggtgggggaggggcgcctcgacgtgggcgacctcgtcgtgctccgcgatgccctcacg
cggaccagcgagttcaaggtgctcgccgcccgcgggctcacgctcaccgaggtcggatac
cccgccgacgacctcctcgccgcgcgggcagcccagacccgcgcccgccgggaccacgag
accgactga
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