Microbacterium sp. PAMC 28756: AXH82_11015
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Entry
AXH82_11015 CDS
T04312
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
mip
Microbacterium sp. PAMC 28756
Pathway
mip03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AXH82_11015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mip03000
]
AXH82_11015
03400 DNA repair and recombination proteins [BR:
mip03400
]
AXH82_11015
Enzymes [BR:
mip01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
AXH82_11015
Transcription factors [BR:
mip03000
]
Prokaryotic type
Helix-turn-helix
AraC family
AXH82_11015
DNA repair and recombination proteins [BR:
mip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AXH82_11015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AMG83862
LinkDB
All DBs
Position
2306994..2308502
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AA seq
502 aa
AA seq
DB search
MSYSFDERYRAISARDTRFDGQFVTAVRSTGIYCRPSCPARTPKPQNVTFYPTSAAAHEA
GYRACKRCLPEAAPGSPAWDVRGDTAARAMRLIASGVVEREGVPGLASRLGYSSRHLTRL
LTTELGAGPLALARAHRAHTARMLLVGTDMPIADVAFAAGFHSVRQGNDTIREVFGLTPG
ELRARRRTPSAAVPGTIDLVLPYRGPLDAAGVFAWMAARAVTGVEEATATSFSRHLRMPG
GPAWFEVRQEETERLHLRARVAQLGDLAPLVATARRIFDLDADPLAVDEALAAHPPLAPL
VARTPGIRVPGAADPHEMLIRAMIGQQITVVAARTTLTALTDALGERTPDGLLFPTMSAI
AAHGAEVLRGPAARIRAVTGAAAALADGSLTLTVGDDGPTQRAALLAMPGIGPWTADYVR
MRVLGDPDVLLPGDVALRAGAAASGLPADPKTLTAWAERTAPWRSYLSAHLWRAAPIRPA
GPRRRSAVRPARDIASDTEETS
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgagctactccttcgacgagcgctaccgggcgatcagcgctcgggacacccgcttcgac
gggcagttcgtcaccgccgtgcgctcgacggggatctactgccggcccagctgcccggcc
cgcacgccgaagccgcagaacgtcacgttctatccgacgagtgccgcggcgcacgaggcc
ggctaccgcgcgtgcaagcggtgcctgccggaggccgcccccgggtcgcccgcgtgggac
gtccgcggagacacggccgcgcgggccatgcgcctgatcgcgtccggcgtggtcgagcgc
gagggtgtgccaggactcgcgtcgcgactcggctactcgagccgtcatctcacgcggctg
ctgacgaccgagctcggcgccggaccgctcgcactcgcgcgagcgcaccgcgcccacacg
gcccgcatgctcctcgtgggcaccgacatgcccatcgcggacgtcgccttcgccgccggt
ttccacagcgtccgtcagggcaacgacacgatccgcgaggtgttcggtctcacgccgggg
gagctgcgtgcccgccgccgcacgccctccgcggccgtacccggaacgatcgacctcgtc
ctgccgtaccggggccccctggatgcggccggagtcttcgcgtggatggccgcgcgagcc
gtgacgggcgtcgaggaggccacggcgacgtcgttctcccgtcatctccggatgccgggc
ggccccgcgtggttcgaggtgcgtcaggaggagacggagcggttgcatctccgggcccgg
gtcgcgcagctcggcgacctcgcgccgctggtggccacggcacgccgcatcttcgacctc
gacgccgacccgctcgcggtcgacgaggccctggccgcgcacccgcccctcgcccccctc
gtggcgcggacccccggcatccgcgtgcccggggctgccgatccgcacgagatgctcatc
cgcgcgatgatcgggcagcagatcacggtcgtcgccgcccgcaccacgctcaccgccctc
accgacgcgctgggggagcggacccccgacggcctgctgttcccgacgatgtcggccatc
gcggcgcacggggcggaggtgctgcgcggccccgccgcccggatccgcgccgtgacggga
gccgccgcggccctggcggacgggagcctgaccctcaccgtgggcgatgacggtccgacg
cagcgcgccgccctcctcgcgatgcccggcatcggaccctggaccgccgattacgtgcgg
atgcgggtgctcggcgatccggacgtgctgctccccggcgacgtggctctccgtgccggt
gccgcggcctccgggctgcccgccgacccgaagaccctcaccgcctgggcggagcgcacc
gcaccgtggcggagctacctcagcgcgcatctgtggcgtgccgccccgatccgtcccgcc
ggaccgcggcgcagatccgccgtccggcccgcccgcgacatcgcatccgacaccgaggag
acctcatga
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